Rahnella victoriana: J9880_06115
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Entry
J9880_06115 CDS
T07871
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00730
Thiamine metabolism
rvc01100
Metabolic pathways
rvc01240
Biosynthesis of cofactors
Module
rvc_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
J9880_06115 (thiC)
Enzymes [BR:
rvc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
J9880_06115 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UHM91922
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Position
1318381..1320333
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AA seq
650 aa
AA seq
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MSSTQKPVTSEKKSSNRREQRAQAQSFIDSLQGEAFPNSRRIYLHADRDDIGVPMREIQL
SPTLVGGGKDNPQFEDNEAIPVYDTAGPYGDPSAVIDVHIGLEKLRTRWINERADTEELP
QVSSGFTQQRLADEGLDHLRFEHLPRPRKAMSGKNVTQLHYARKGIITPEMEFIAIRENM
GHERIRGEVLRQQHPGESFGAHLPANITAEFVRQEVAAGRAIIPANINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPI
GTVPIYQALEKVNGVAEDLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTARRLTGI
VSRGGSIMAKWCLSHHRESFLYEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFA
ELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAP
GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHP
GAQIRDNAMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCGPKFCSM
KITQEVRDYAAALEAKAQPIELVESGMAQMSAEFRSRGSELYHPATEINK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtacccaaaaacccgttacttcagaaaagaaatcgtcaaaccgccgcgaacaa
cgcgcgcaggctcagtcatttatcgacagcctgcagggcgaagcctttccaaactcccgc
cgtatttatctgcacgctgaccgcgacgatatcggcgtgccgatgcgtgaaatccagctc
agcccgacactggtcggcggcggcaaagacaatccgcagttcgaagataacgaagcaatc
cccgtctatgacaccgccgggccttatggtgatccgtcggcagtgattgatgtacacatc
ggtctggaaaaattacgcacccgatggatcaacgagcgggcggacacggaagaacttccg
caggtcagctccggctttacccagcagcgtctggcggatgaaggtctggaccatctccgc
ttcgaacacctgccacgcccgcgcaaagcgatgtcgggtaaaaatgtcacgcagttgcat
tacgcacgcaaaggcataattacgcctgaaatggaattcatcgccatccgcgagaacatg
ggacatgagcggatccgcggcgaggttttgcgccagcaacatcccggcgaaagttttggt
gcgcatctgcccgccaacattacggcggaattcgtgcgtcaggaagtcgccgccggtcgc
gccatcattcctgccaatatcaatcaccccgaatcagagccgatgatcattggccgcaat
tttctggtgaaagtgaatgccaatatcggcaactcggcggtgacgtcatccattgaagaa
gaagttgagaaactggtgtggtcgacgcgctggggcgcggacacggtaatggatctctcc
accggccgctatattcatgaaacccgtgaatggatcctgcgtaacagcccggtgccgatc
ggtacagtaccgatttatcaggcgctggaaaaagtgaatggcgtggccgaagacctgaac
tgggaaatgttccgcgatacgctgctggaacaggcagagcaaggcgtcgattacttcacc
attcacgccggtgtgttgctgcgctacgtaccgatgaccgccagacgcctgaccggcatt
gtgtcgcgcggcggttcaatcatggcgaaatggtgtctttctcatcatcgcgaaagtttc
ctgtatgagcatttccgtgaaatctgcgaaatctgcgccgcttacgatgtctcgctgtcc
ctgggcgacggcctgcgtcctggctcgattcaggatgccaatgacgaagcgcagttcgcc
gaattacgcacgctcggcgaactgactaaaattgcctgggaatacgatgttcaggtgatg
atcgaagggccggggcatgtgccgatgcagatgatccgccgcaatatgaccgaagaactc
gagcattgccacgaagcgccgttctataccctcggcccgttgaccaccgatattgcgccg
ggttacgaccatttcacttccggcatcggtgccgcgatgattggctggtttggctgcgcc
atgctctgttatgtcacgccaaaagagcatctcggcctgccgaacaaagaagacgttaag
cagggtttgattacctacaaaatcgcagcccatgccgccgatttagccaaaggccatccg
ggggcacaaatccgcgataacgccatgtcaaaagcgcggttcgaattccgttgggaagac
cagtttaatctggctcttgatccggccaccgcccgcgcctaccacgatgaaacgctgccg
caggaatccggcaaagtcgcacacttctgttcaatgtgtggcccgaaattctgttcgatg
aaaattactcaggaagttcgcgattacgccgccgcgctggaagccaaagcccagccaata
gaactcgttgaatccggtatggcgcagatgtcagctgaattccgttcacgcggcagcgag
ctttatcatcctgccacggagatcaacaaatga
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