Rahnella victoriana: J9880_06690
Help
Entry
J9880_06690 CDS
T07871
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rvc
Rahnella victoriana
Pathway
rvc03420
Nucleotide excision repair
rvc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J9880_06690 (uvrD)
03430 Mismatch repair
J9880_06690 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_06690 (uvrD)
Enzymes [BR:
rvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J9880_06690 (uvrD)
DNA repair and recombination proteins [BR:
rvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J9880_06690 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
J9880_06690 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DUF4391
Motif
Other DBs
NCBI-ProteinID:
UHM92019
LinkDB
All DBs
Position
complement(1451029..1453191)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVEKCSPYSIMAV
TFTNKAAAEMRHRIDQLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQM
RLIKRLIKALNIDDKQWPPRQAMWYINGKKDEGLRPQHVETYNNPIEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNLMVDEFQDTNSIQYAWIRLLAGDN
NNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPNAETIRLEQNYRSTSTILKAANSLIENN
NGRMGKNLWTEDGEGEPISLYCAFNELDESRFVVNRIKTWQDNGGALKDCAILYRSNAQS
RVLEEALLQMAMPYRIYGGQRFFDRQEIKDALAYLRLMSNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTMWQATRALLQEKVLAGRAASSLQRFTELVDALAHETADMPLHVQ
TDRVIKDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADANQDATQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVSHRPSRFVGELPEDCVEEVRMRANVSRPMSNRSVG
TPTSVSDTGFKLGQRVLHPKFGEGTIVNMEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgacagcctgaatgaaaaacaacgtgaagccgtggccgcg
ccgcgcagcaatctgttggtgctggccggggcaggcagtggcaaaacccgtgtgctggtt
caccgcattgcgtggctgctggcggtcgaaaagtgctcgccgtattccatcatggcggtc
acctttactaacaaagcggcggcagaaatgcgccaccgtatcgaccagctgattggcacc
agtcagggcggcatgtggatcggtaccttccacggtctcgcgcaccgtttgctgcgtgcg
caccatttagacgccaatctgccgcaggatttccaaattctcgacagcgacgaccagatg
cgtctgatcaagcgcctgatcaaagcgctgaacatcgacgataaacaatggccgccgcgt
caggcgatgtggtacatcaacggcaaaaaagacgaaggtctgcgcccgcagcatgtcgaa
acctacaacaacccgattgaagcaacctggctgcggatttatcaggcctatcaggaagcc
tgtgaccgtgccgggctggtggattttgccgaactgttgctgcgcgcccacgaactctgg
ctgaacaagccgcatattttacagcattaccgcgaacgctttaccaacctgatggtggac
gaattccaggacaccaacagcattcagtacgcgtggattcgtctgctggcaggcgataac
aataacgtgatgatcgtcggcgacgatgaccagtcgatctacggctggcgcggggcgcag
gtcgaaaacatccagcgtttcctgaaagatttcccgaatgcggaaaccatccgtctggag
cagaactaccgctcgaccagcaccatcctgaaagccgccaactcgctgattgaaaacaac
aacggtcgtatggggaaaaacctgtggaccgaagacggcgaaggcgagccgatttcactg
tattgcgccttcaacgaactggatgaatcgcgctttgtagttaaccgcatcaaaacgtgg
caggacaacggcggcgcgctgaaagactgtgccattctgtaccgcagcaacgcccagtcg
cgtgtgctggaagaagccttattgcaaatggcgatgccgtaccgtatttacggcgggcag
cggttcttcgaccgtcaggaaatcaaagatgcgctggcgtatttgcgtctgatgtccaac
cgtaatgacgatgccgcattcgagcgcgtggtgaacaccccgacgcgcggtatcggcgac
cgtacgctggatgtggtgcgccagaccgcccgtgatcgtcagctgaccatgtggcaggcc
acgcgcgcgctgttgcaggaaaaagtgctggcgggccgtgccgcgtcttcactacaacgc
tttaccgaactggttgacgcactggcgcatgaaacggcggatatgccgctgcatgtgcag
actgaccgggtgatcaaagattccggcctgttcatcatgtatgagcaggagaaaggcgaa
aaaggtcaggctcgtattgaaaacttagaggaactggtaacggcgacgcgtcagttcagc
tatcaggatgaagacgaagacctgatgccgttgcaggcatttctgtctcatgccgcactg
gaagcgggcgaagggcaggcagatgccaatcaggacgccacgcagctgatgacgctgcac
tcggccaaagggttggagttcccgcaggtgtttatcgtcgggatggaagagggcatgttc
ccgagccagatgtcgctggaagaaggcgggcgtctggaagaagaacgccgtctggcctat
gtcggtgtgacccgcgctatgcagaaactgaccctgacctacgcggaaacccgccgttta
tacggtaaagaagtctcgcaccgcccgtcacgttttgtcggtgaattgccggaagactgt
gtcgaagaagtcagaatgcgcgccaatgtctcgcgtccgatgagcaaccgcagcgtcggc
acgccaaccagcgtcagcgacaccggcttcaaactcggccagcgcgtcctccatccaaaa
ttcggtgaaggtaccatcgttaacatggaaggcagcggcgaacacagccgtttgcaggtg
gcgttcccgggggaagggattaagtggctggtcgccgcctacgcccgtctcgaagccgtc
tga
DBGET
integrated database retrieval system
