Rahnella victoriana: J9880_07275
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Entry
J9880_07275 CDS
T07871
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00541
Biosynthesis of various nucleotide sugars
rvc01100
Metabolic pathways
rvc01250
Biosynthesis of nucleotide sugars
Module
rvc_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J9880_07275 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rvc01005
]
J9880_07275 (rfaD)
Enzymes [BR:
rvc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
J9880_07275 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rvc01005
]
Core region
J9880_07275 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
UHM92122
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Position
1578752..1579684
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIIKSLNDMGYRDILVVDNLKDGTKFVNLVDLDIADYCDKEDFIASI
VAGDDLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHYCLDRSIPFLYASSAATY
GSQSTSFVEDRKYEQPLNVYGYSKFLFDQYVREILPHAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQIKAGENPKLFSGSEGFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRS
ESFQAVADAVVAYHKSGDIEYIPFPEKLKGRYQSFTQADMTALRNAGYDKPFKTVAEGVT
EYMSWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgtcactggcggcgctggttttatcggcagcaatattattaaatcgctcaat
gatatgggataccgcgatattctggtggtcgataacctgaaagacggcaccaagttcgtc
aatctggtggatctggatattgcggattattgtgacaaagaagatttcattgccagtatc
gttgcaggcgacgatttaggtgatattgacgcgatcttccatgaaggcgcgtgttcgtcc
actactgagtgggacggcaagtacatgatggataacaactatcagtactccaaagatatc
ctgcattattgcctggatcgcagcattcctttcctttacgcctcttctgccgccacctat
ggcagccaaagcaccagctttgttgaagatcgtaaatatgagcagccactgaacgtctac
ggttactccaagttcctgtttgaccagtatgttcgcgaaatcctgccacacgcggaatcc
cagatttgtggtttccgttacttcaacgtctacggaccacgcgaaggtcataaaggcagc
atggccagcgtcgcattccacctgaacaaccagattaaagccggtgaaaatccgaagctg
ttctctggcagcgaaggcttcaagcgtgacttcatttatgtgggtgacgtggcagcggta
aacctgtggttctggcagaacggcgtgtccggtattttcaactgcggaaccggccgctct
gaatccttccaggcagttgcggatgccgtggtcgcgtaccacaaatcaggcgatatcgaa
tacattcctttcccggaaaaactgaaaggtcgttaccagtccttcactcaggctgacatg
acggcgctgcgtaatgccggttatgacaaacctttcaaaacggttgccgaaggtgtgacg
gaatacatgagctggcttaaccgcacagtataa
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