Rahnella victoriana: J9880_07320
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Entry
J9880_07320 CDS
T07871
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00540
Lipopolysaccharide biosynthesis
rvc01100
Metabolic pathways
Module
rvc_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
J9880_07320 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rvc01005
]
J9880_07320 (waaA)
Enzymes [BR:
rvc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
J9880_07320 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
J9880_07320 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
J9880_07320 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
J9880_07320 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
rvc01005
]
Lipid A
J9880_07320 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_4
DUF4312
Motif
Other DBs
NCBI-ProteinID:
UHM92130
LinkDB
All DBs
Position
1588706..1589980
Genome browser
AA seq
424 aa
AA seq
DB search
MNIFYNIIIYLIQPLIWIRLLLRSRKSPAYRKRWAERYGFCKGKVVSGGIMLHSVSVGET
LAAIPLVRALRHRYPSLPITVTTMTPTGSERVQSAFGKGVHHVYLPYDLAGSVNRFLDEV
NPKLVIIMETELWPNLISALHRRKIPLVIANARLSARSAKGYQKLGKFIRTILQRITLIA
AQNQEDGERFLSLGLKRNQLAVTGSLKFDISVTPELAAKAIALRSQWASRRQVWIATSTH
EGEETLLLEAHKELLKAHPNLLLILVPRHPERFPVACDLTRKAGLSFIQRSSGEVPSSAT
QVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHALPVLMGPHTFNFKDICAK
LAQDDGLITVTDTASLVKEISTLLTDEDYRLYYGRHAVEVLHQNQGALQRLLHLLEPYLP
VRSH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttttataatataatcatatatttaattcagccattgatttggatccgtttg
ctgttgcgcagccgcaagtcgcctgcataccgtaaacgctgggctgaacgttatggcttc
tgcaaagggaaggttgtctccggcggcattatgctgcattcagtctccgtgggtgaaaca
ctggcggcaatcccgttagtccgcgccttacgccaccgttatccgtcgttgcccatcacc
gtgaccacgatgacaccgacaggttctgagcgcgtgcagtccgcgtttggcaaaggcgtg
catcacgtttatctgccttatgatctggcaggatcggtcaaccgcttcttggatgaggtc
aacccgaagctggtgatcatcatggaaaccgagctttggccgaacctgatcagcgccctg
catcgccgcaaaattccactggtgatcgccaatgcccgcctttctgcccgttcagcgaag
ggatatcagaagctgggtaaattcatccgtaccattttgcaacgcatcaccctgatcgcc
gcacagaatcaggaagacggcgaacgcttcctgtctttagggttgaaacgcaatcagctc
gcggtcaccggcagtctgaaattcgatatctctgtcacgccggaattagccgccaaagcc
atcgcattgcgcagccagtgggcgtcacgccgtcaggtatggattgcgaccagcacccat
gaaggtgaagaaaccttgctgctggaagcgcacaaagaattactcaaagcgcacccgaac
ttgctactgattctggtaccgcgccaccctgaacgtttcccggtcgcgtgcgacctcacc
cgtaaagcgggtctgtcattcattcagcgcagctcaggtgaagttccttcttcggctacg
caggtggtgattggcgataccatgggtgaacttatgctgctgtacggcattgccgatctg
gcgtttgtcggcggcagtctggtggagcgtggcgggcataatccgctggaagcagccgca
catgcgctcccggtactgatggggccacacacctttaatttcaaagacatctgcgccaaa
ctggctcaggacgatggcctgatcaccgtgactgacacggcgtcgctggtgaaagagatt
tccaccctgctgacggatgaagattatcgtctctattacgggcgtcacgcggtcgaagtg
ctgcatcagaatcagggtgcattgcaacgcctgctgcatttactggagccttatctgcct
gtccggagtcattaa
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