Rahnella victoriana: J9880_07335
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Entry
J9880_07335 CDS
T07871
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rvc
Rahnella victoriana
Pathway
rvc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J9880_07335 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_07335 (mutM)
Enzymes [BR:
rvc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J9880_07335 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J9880_07335 (mutM)
DNA repair and recombination proteins [BR:
rvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J9880_07335 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UHM92133
LinkDB
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Position
complement(1591245..1592054)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLKGHTILHAIVRNPRLRWPVSAEILALSDQPVLSVQRRAKYLL
VELKTGWIIIHLGMSGSLRVLPEETEAGKHDHVDLVMDTGHVLRYTDPRRFGAWLWSADL
AASNVLAHLGPEPLSEDFTAEYLFEKSRTKKSPIKPWLMDNKLVVGVGNIYASESLFVAG
ISPDRPAHSLKRDETELLVRTIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPVESKKHAQRTTFFCPRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacctgaggttgaaaccagccgcagagggattgaaccctatctgaaaggt
cacacgatactgcatgccatcgtgcgcaatccacgcctgcgctggcctgtctcggcggaa
atcttagcgttaagcgatcagcccgttctgagtgtgcagcgccgggcaaaatatctgctg
gtcgagctgaaaaccggctggatcatcatccatctgggtatgtccggcagtttgcgtgta
ctgccggaagaaacagaagcaggcaaacatgaccatgttgatctggtcatggataccgga
catgtgctgcgttataccgatccgcgacggtttggtgcctggttgtggtctgctgatctg
gcggccagtaatgttctggcgcatctggggccggagccgttaagcgaagatttcacagca
gagtatttgtttgagaaatcgcgcacaaaaaaatcgccgatcaaaccctggctgatggac
aacaaactggtggtcggggtagggaatatctacgccagcgagtccttgtttgttgccggt
atttcacctgacagacctgctcattcgctcaaacgtgatgagacggaattactggtgaga
acgattaaagcggtattgctgcgctcgattgaacagggcgggacgacgctgaaagacttt
ttacagtcggatggaaagccgggatattttgcgcaggaattgcaggtatacggacgggct
ggcgaaccttgccgggcatgtggtacgcctgttgagagtaaaaaacacgctcagcgcacc
acgtttttctgcccgcgctgtcagcgctaa
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