Rahnella victoriana: J9880_07505
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Entry
J9880_07505 CDS
T07871
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rvc
Rahnella victoriana
Pathway
rvc03030
DNA replication
rvc03410
Base excision repair
rvc03420
Nucleotide excision repair
rvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J9880_07505 (polA)
03410 Base excision repair
J9880_07505 (polA)
03420 Nucleotide excision repair
J9880_07505 (polA)
03440 Homologous recombination
J9880_07505 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvc03032
]
J9880_07505 (polA)
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_07505 (polA)
Enzymes [BR:
rvc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J9880_07505 (polA)
DNA replication proteins [BR:
rvc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J9880_07505 (polA)
DNA repair and recombination proteins [BR:
rvc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J9880_07505 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J9880_07505 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
DUF7282
DUF2529
Motif
Other DBs
NCBI-ProteinID:
UHM92167
LinkDB
All DBs
Position
complement(1629188..1631992)
Genome browser
AA seq
934 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYTPSHVAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVRAMGLPLLMVSGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPDEVVEKYGVPPSLIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDDLYADLDKVSTLTFRGSKTMAAKLAENK
DVAYLSYQLATIKTDVKLDLTCAELTVSEPDADELHQLFGRYEFKRWLADVESGTWLTSK
KSAGKAPSAAKKKAADQETASAVSVEPNQLSQDGYVTILDQATLDEWIGHLKASEVFAFD
TETDGLDTLTANLIGLSFATQAGKAAYLPVAHDYLDAPVQLDRDDVLKQLKPVLEDEKQL
KVGQNLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRHDMDSLADRYLGHKTVSFEE
IAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRIAESESLKKVFTDIEMPLVP
VLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQK
LPILKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPQSGRV
HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYIILAADYSQIELRIMA
HLSKDEGLLKAFAEGKDIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYGMSAFGLSR
QLNIPRKESQRYMDLYFERYPGVLEYMERTRAQASEQGYVETLDGRRLYLPDIKSSNAMR
RKGAERAAINAPMQGTAADIIKRAMISVDAWLKQPDAPRARIIMQVHDELVFEVHKDDVE
AASETIRNLMESSMTLAVPLKVDVGTGENWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatagcagaaaaccccttaatcctggtggacggttcgtcctacctttatcgc
gcttaccatgcgtttcctccgctgaccaactctgcgggcgaaccgaccggcgcgatgtac
ggtgtgctgaatatgttgcgcagtctgttgctgcaatacacaccaagccatgttgcagtg
gtttttgacgcgaaaggcaaaaccttccgtgacgaactcttcgaacagtacaaatcgcat
cgccctccgatgcctgatgatttgcgctctcaaattgagccccttcatcagatggtcagg
gcaatgggtttaccattgctgatggtctcgggtgtggaagcggatgacgtgattggtacg
ctggccctcgaagcagagaaagccgggcatgcggttctgatcagtaccggtgataaagat
atggcacagctggtaaccccgggagtgacattaattaacaccatgaacaatgcgattctg
gggccagatgaagttgttgaaaagtacggtgtaccgccttcactgattattgatttcctc
gcgctgatgggcgattcctcggacaatattcctggcgtgccgggcgtgggtgaaaagacc
gcacaggctctgttgcagggcattgggggtcttgatgacttatatgcggatctcgataaa
gtgtcgacgctgactttccgtggttcaaaaaccatggccgctaagctcgcggaaaacaaa
gacgttgcctatctctcttaccagctggcaaccatcaaaacggacgtgaagctggatctg
acctgcgcagaactgaccgtttcagaaccggatgcggatgaacttcaccagttatttggt
cgttatgaatttaagcgctggctggctgatgtcgaatccggcacctggctgaccagtaaa
aagtcggcgggtaaagcgccttcagcagcgaaaaagaaagctgccgatcaggaaactgcc
tccgcggtatcggtcgaacctaaccaactttctcaggacggttacgtcaccattttggat
caggcgacgctggatgaatggatcggtcatctgaaagcctctgaggtatttgccttcgat
actgaaacggatggtctggatacgctgacggccaatctcatcggtttatcttttgcgacg
caagcaggcaaagccgcctatttgccagtcgctcatgattatctggacgcgccggtacag
ctggatcgcgatgacgtattgaaacagctcaaacctgtgcttgaagatgaaaaacagctg
aaagtgggtcagaacctgaagtttgatcgcggcgttttactgcgttacgacattgaatta
aaaggtatagccttcgataccatgctcgagtcttatgtgctcgacagcgtatctggccgt
cacgatatggacagccttgccgatcgctatctgggacataaaacggtgagctttgaagaa
attgccggcaaagggaaaaaccagcttaccttcaaccaaatcgcactggagcaagcggca
ccgtatgcggcggaagatgcggacgtcacattgcagttgcatcaggcactctggccccgg
attgcggaaagtgaatccctgaaaaaagtcttcacggatattgaaatgccgctggtgccc
gtgttgtctcatatcgaacgtaccggtgttctgattgatcagaatatcctcgccgcccat
tcaaaagagctggcgatccgcctgaatgagctggaaaacaaggcgcatgagctggcagaa
gaacctttcaatctgtcctcaaccaaacagttgcaggccattctgtatgaaaaacagaaa
ctgccgatcctgaagaaaacgccgggtggtgcgccttcgactaatgaagaagttctggct
gaactggctctggattacccgctgccaaaagtcattcttgaatatcgtggtctggcaaaa
ctgaaatcgacgtacaccgacaaactgccattgatgatcaatccgcagtccgggcgcgtg
catacgtcttatcatcaggcggtaacggccaccggtcgtctgtcttccagtgatcccaat
ctgcaaaacattccggtgcgtaatgacgaaggtcgccgtattcgtcaggcgtttatcgcg
cctaaggattacatcatcctggctgccgactattcgcagatcgaactgcgcatcatggcg
catttatcgaaagatgaaggtttgctgaaagcgttcgccgaggggaaagacatccaccgc
gcaacggctgcagaagtcttcggcacgccgctggagaaggtttctggcgagcaacgccgc
agtgcgaaagcgattaacttcggcctgatttatggcatgagcgcctttggtctgtcacgt
cagctgaatatcccgcgcaaagaatcccagcgttatatggatttatactttgagcgctat
ccgggcgtgctggaatacatggagcgtacccgcgctcaggcgtcggaacaggggtatgtt
gaaacgctggatggtcgccgcctgtatctgccggacattaaatccagcaacgccatgcgc
cgtaaaggtgctgagcgtgcagcgattaatgccccgatgcaggggaccgcggctgacatt
atcaaacgtgccatgatcagcgtcgatgcctggctgaaacaaccggatgcaccgcgtgcc
cgcatcatcatgcaggtacacgatgaattggtgtttgaagtgcataaggatgatgttgaa
gcagcaagcgaaacaatccgcaacctgatggaatcaagcatgacgctggccgtgccgttg
aaagttgacgtgggtaccggtgaaaactgggatcaggctcactaa
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