Rahnella victoriana: J9880_07795
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Entry
J9880_07795 CDS
T07871
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvc03032
]
J9880_07795 (gyrB)
03400 DNA repair and recombination proteins [BR:
rvc03400
]
J9880_07795 (gyrB)
Enzymes [BR:
rvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J9880_07795 (gyrB)
DNA replication proteins [BR:
rvc03032
]
Prokaryotic type
DNA Topoisomerases
J9880_07795 (gyrB)
DNA repair and recombination proteins [BR:
rvc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J9880_07795 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
UHM92221
LinkDB
All DBs
Position
1691796..1694210
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIQ
VTIHADNSVSVQDDGRGIPTGIHEEEGVSAAQVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHTQTYVHGEPQDPLKVIGDTDVTGTTVRFWPSFNTFTNHT
EFEYDILAKRLRELSFLNSGVAIRLLDKRDGKNDHFHYEGGIKAFVEYLNKNKTPIHPTV
FYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRSAMTRTLNAYMDKE
GYSKKSKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVDY
LMENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVFIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIAMDGATLHANAHAPALAGEPLEKLVAEHHSVQKMIGRMERR
YPRALLNNLIYQPTLPGADLADQAKVQAWMESLVARLNEKEQHGSSYSAIVRENREHQLF
EPVLRIRTHGVDTDYDLDADFIKGGEYRKICALGEQLRGLIEEDAFIERGERRQPVTSFE
QALEWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPEQRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaggtattaaaagggctggacgcggtgcgt
aagcgccccggcatgtatatcggcgataccgatgacggcactggtctgcaccacatggta
ttcgaggttgtggacaacgctatcgacgaagccctcgcgggccactgtaaagagattcag
gtcacgatccatgcggataactctgtgtccgtacaggatgatggtcgtggcattccgacc
ggtattcatgaagaagagggcgtttctgctgctcaggtcatcatgaccgttcttcatgcc
ggcggtaaatttgacgataactcgtataaagtctccggcggtctgcatggcgtgggtgtt
tccgtcgttaacgccctgtcggaaaaactggaactggttatccgccgcgaaggcaaagtc
catactcagacttacgtgcacggtgagcctcaggatccgctgaaagtgattggcgatact
gacgtgaccggtaccacggtacgtttctggccaagcttcaacaccttcaccaatcacact
gaattcgagtatgacattctggcgaaacgcctgcgcgaactgtcattcctgaactccggc
gtggctatccgcctgctggacaagcgtgatggtaaaaatgatcacttccattatgaaggc
ggtatcaaagctttcgtggaatatctgaacaaaaacaaaaccccaatccatccgaccgtg
ttctatttttccacggtaaaagatgacattggcgttgaagtggcgttgcagtggaacgat
ggtttccaggaaaacatttactgcttcaccaacaacattccacagcgcgatggcgggact
cacttagccggtttccgttcggcgatgacccgtaccctgaacgcgtacatggataaagaa
ggctacagcaagaaatctaaaatcagcgccaccggtgacgatgcccgtgaaggcctgatt
gctgtggtgtcggtgaaggttccggatcctaagttctcttctcagaccaaagacaaactg
gtttcttccgaagtgaaaacggccgttgaaacgctgatgaacgagaagctggtggattac
ctgatggaaaacccgtcagacgccaaaatcgttgttggtaaaatcatcgacgcagcgcgt
gcccgtgaagcagcacgtaaagcccgtgaaatgacccgtcgtaaaggcgcgctggacctg
gctggcttgccaggcaaactggcggactgtcaggaacgcgacccggctcactccgaactg
tacttagtggaaggggactcagcgggcggctctgcaaaacaaggccgtaaccgtaagaac
caggcgattctgccgttgaaaggtaaaatcctcaacgttgagaaagcgcgcttcgacaaa
atgctctcttctcaggaagtggccacgctgattaccgcactcggttgcggcattggccgt
gacgaatacaacccggacaaactgcgctatcacagcatcatcatcatgaccgatgccgac
gtcgatggttcgcacatccgtaccctgttgctgacattcttctaccgtcagatgcctgaa
attgtagaacgtggccacgtgtttatcgcccagccgccgttgtacaaagtgaaaaaaggc
aagcaggaacagtacattaaagatgacgaagcgatggatcagtatcagatttccattgcg
atggacggggcaacgttacacgccaacgctcatgcgccagccctggcgggtgaaccgctg
gagaaactggtcgctgaacatcacagcgtgcagaaaatgattggccgcatggaacgtcgt
tatccgcgtgcgctgctgaataacctgatctatcagccgaccctgccgggtgcagatctg
gctgatcaggcgaaagtgcaggcctggatggaatcgctggtggcgcgtctcaacgagaaa
gagcagcacggcagttcttacagcgcgatcgtgcgtgaaaaccgcgaacatcagctgttc
gagccggttctgcgtatccgcacccacggtgttgataccgattacgatctggatgccgac
ttcatcaaaggcggcgaataccgcaaaatctgtgcgctgggcgaacagctgcgcggcctg
atcgaagaagatgccttcatcgaacgtggcgaacgccgtcagcccgtgaccagcttcgaa
caggcgctggaatggctggtgaaagaatcccgtcgtggtctgtcgattcagcgatacaaa
ggtctgggtgaaatgaaccctgagcagctgtgggaaaccaccatggatcctgagcaacgt
cgcatgttacgtgtgaccgtgaaggatgccatcgccgctgaccagttgttcacgacgctg
atgggcgatgcggttgaaccgcgccgcgcctttatcgaagagaacgccctgaaagccgcc
aatatcgatatctga
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