Rahnella victoriana: J9880_08255
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Entry
J9880_08255 CDS
T07871
Name
(GenBank) LysR family transcriptional regulator
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvc03000
]
J9880_08255
Transcription factors [BR:
rvc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
J9880_08255
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
UHM92306
LinkDB
All DBs
Position
complement(1788200..1789126)
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AA seq
308 aa
AA seq
DB search
MELKWFEDFLSVSQCYSFTRAASERNITQSALSRRIKQLEEWLGVPLFDRKTYPIRLTPE
GQDFLHTAAELVFSMTQLRSDLRERHAQKHAIVHFAALNTLSLTFFPDWINQIDPSHQYG
YIRLCDQQPSFSGNISLLLDGETDFLLTYAHDSVPLMKQLERFPYIELGKENALAVCAPD
DKGKPLFPLHTFSGTRTPLPYLSYGNRSFFAHALTALFASRPLPLKPIYENPMCSGLKAM
TVSGCGVSWLPTSLISEELASGSLLRAGERSWDIQASIRLYRLEKFRTPQAERLWNKASL
LHQTRAVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagtggtttgaagattttctcagtgtgtctcagtgctatagctttacgcga
gccgccagcgaaaggaacatcacccagtccgcgctgagccgccggattaaacaactggaa
gaatggttaggcgtgccgttatttgaccgcaaaacctacccgatacgactgactccggaa
ggccaggatttcctgcataccgccgcagaactggtgttttccatgacgcagttgcgcagc
gatctgcgtgagcgtcatgcgcagaagcacgccatcgtgcatttcgcggcgcttaatacg
ctctccctgacctttttccccgactggattaaccagatcgacccgtcgcatcagtacggc
tatatccgtttgtgcgatcagcagccctctttcagcggcaatatttcgctgctgctggat
ggcgaaaccgattttctgctgacgtacgcccacgattcggttccgctgatgaaacagctc
gaacgctttccgtatatcgaactgggaaaagaaaatgcgctggcggtgtgtgcgccggac
gataaaggcaaaccgctgtttcctttacacacctttagcggcacacgtaccccgttgcct
tatctcagttacggcaaccgttccttcttcgcccacgcgctgaccgccctgtttgcctcg
cgcccgctgccgctgaaaccgatttacgaaaatccgatgtgcagcggactgaaagcgatg
accgtgtccggctgcggcgtgtcatggctgcccaccagcctgatcagtgaagaactggcg
agcggatcgctgctccgtgccggggaacgcagctgggatattcaggccagcatccgtctt
taccggctggaaaaattccgtaccccgcaggccgaacggctgtggaataaagccagcctg
ctgcatcagacccgcgccgtcgcctga
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