Rahnella victoriana: J9880_08955
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Entry
J9880_08955 CDS
T07871
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvc03000
]
J9880_08955
Transcription factors [BR:
rvc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
J9880_08955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_23
HTH_8
HTH_30
HTH_28
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UHM92442
LinkDB
All DBs
Position
complement(1948738..1949658)
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AA seq
306 aa
AA seq
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MIDSEITFRKLEIFLAYMEKQNITRAAEQLGLSSVSVHRALHSLEEGLRCPLFIHRGRNL
LPLPAAEALLEHATQVIEQMEHGILATQRAAGFGDKRLKVGTLYSLTLETIPRLIMGLKL
RRPELELELVMGSNNDLLHKLEDGQLDAILISTSDSTVDAQRYDQLPLFQDDIFLAAPAS
AELASEGTADLRDFKQKKFVSLAEGFATYHGFQEAFQVAGFEPDIVTRVNDIFSMLSLVQ
AGVGYTLIPGRMKGVYENTVKLLPLAEAYQMRQTISLVFPHSREHDPNLLALAAESRMYA
LASRKR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagtgaaattaccttccgtaaactcgaaatttttctcgcttacatggaaaag
caaaatatcacccgcgcagccgagcaactcggtctgagcagcgtcagcgtgcatcgcgcc
ctgcattcgctggaagaaggtttgcgttgtccgctgtttatccatcgtggccgtaacctg
ctgccgttgcccgccgccgaagcgttgctggagcatgccacgcaggtgattgagcaaatg
gaacacggcattctggcgacccagcgcgccgccgggtttggtgataagcgcctgaaagtc
ggcaccttatattcgctgacactggaaaccattccgcgcctgatcatgggactgaaactg
cgccgtccggagcttgaactggaactggtgatggggtcgaataatgatttgctgcacaag
ctggaagacggtcagctggatgccatcctgatttcgaccagcgattcgaccgtcgatgcc
cagcgttacgatcaactgccgctgtttcaggatgatatttttcttgccgcaccggccagt
gcagagctggcgtcagaaggcaccgcagatttacgtgatttcaaacagaagaagttcgtg
tcgctggccgaaggattcgccacctatcacggctttcaggaagcctttcaggtggccggt
ttcgagccggatatcgtgacgcgggtgaacgatattttctcaatgctgagtctggtacag
gcgggtgtcggttacacgctgatccccggcaggatgaaaggcgtgtatgaaaatacggta
aagttactgcccctggcggaagcctaccagatgcgccagaccatctcgctggtcttcccg
cacagccgcgagcacgatccgaacctgctcgccctcgccgctgaaagccggatgtatgcg
ctagcgagcagaaagcgctga
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