Rahnella victoriana: J9880_12030
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Entry
J9880_12030 CDS
T07871
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00310
Lysine degradation
rvc01100
Metabolic pathways
rvc01110
Biosynthesis of secondary metabolites
rvc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
J9880_12030
Enzymes [BR:
rvc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
J9880_12030
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
UHM89071
LinkDB
All DBs
Position
2598730..2600877
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AA seq
715 aa
AA seq
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MNIIAIMRPEGAYYKDEPIRELDSALTLLGFQIIYPRDRADLLKLIENNARICGAIFDWD
QHSEELCTAINELNEYLPLYAFINTHSTLDVDVNEMRMVLYFFEYALSAAEDIAKRIRQY
TDEYIDTITPPLTKALFTYVEEGKYTFCTPGHMAGTAFLKSPVGTLFYDFFGAKTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGSEQSYIVTNGTSTANKIVGMYAAPAGSTVLI
DRNCHKSLAHLMMMTNIVPVYLRPNRNAYGILGGIPKREFTRESIEAKIAQTENATWPVH
AVITNSTYDGLLYNTDYIKSTLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGERIPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTSPNYGIVASAETAAAMLRGNP
GRRLINRSVERALHFRKEIQRLREETEGWFFDIWQPEHIDEAECWPLNPDQNWHGFANAD
TDHMYLDPIKVTILTPGMDETGKLEEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTKSMSLMRGLTDFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIVRH
DLPRLMLEAFDVLPEMKMTPYEMFQHQVRGHIDECDIDELVGKVSANMILPYPPGVPVVM
PGEMITEESRAVLDFLIMLCSIGERYPGFDTDIHGTRLTEDGRYLVKVLKLPEAS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcgctatcatgcgcccggaaggggcctactacaaagatgagccaatccgt
gaactggatagcgcactgacgcttctcgggtttcagatcatttatccgcgcgatcgggct
gatctgctcaaactcattgaaaacaacgcccgcatttgcggcgctattttcgactgggat
cagcacagcgaggagttgtgcacagccattaacgagctgaatgagtatctgccgctgtat
gctttcatcaatacacattcgacgctggacgttgatgtgaatgaaatgcgcatggtgctg
tatttctttgaatatgccctgagtgcggcggaggatattgccaaacgcatccgccagtac
accgatgaatacatcgacaccatcacgccgccgctcaccaaagcgttgtttacctacgtg
gaagaagggaaatataccttctgtacgccggggcatatggccggtacggcatttctgaaa
agcccggtcgggacgctgttctatgatttctttggcgcgaaaacgctgaaagccgatgtg
tcgatttcggtgacagaactgggttccttactggatcacaccggaccgcacctcgaagcg
gaagagtatatcgcccgcacatttggctccgagcaaagttatatcgtcaccaacgggacc
tcgacagccaataaaattgtcggaatgtatgccgcaccggcgggcagtacggtattgatt
gaccgcaactgccataaatcgctggctcacctgatgatgatgaccaatatcgtgccggtc
tatttgcggccgaaccgtaatgcctatggcattctcggcggaattcctaagcgggaattc
accagagaaagtatcgaggcgaaaatcgcacagactgagaatgccacctggcccgtccat
gcggtgatcaccaattccacgtacgatggcttgctgtacaacacggattacatcaaaagt
acgctggatgtgccgtcgattcatttcgattccgcctgggtgccatacaccaatttccac
ccgatttatgacggtaaaagcgggatgagtggcgaacgaattccgggaaaagtcatctac
gaaacgcaatcgacacataagttactggcggctttctcacaggcttcgatgatccacatt
aaaggggattacgatgaaagcacctttaatgaagcttatatgatgcacaccaccacatcg
ccgaactacggcattgtggcttccgcagaaactgccgcagcaatgttgcggggcaatccc
gggcgtcgcctgatcaaccgctcggtggaacgtgcgctgcattttcgtaaagagatccag
cggctgcgtgaagaaaccgagggctggttctttgatatctggcagcccgaacatattgat
gaagccgaatgctggccgctgaatccggatcaaaactggcatggtttcgcgaatgcagat
acggatcatatgtatctggatccgatcaaggtgacgatcctgacacccggtatggatgaa
acaggcaaactggaagaagaggggatcccggccgcattagtggcgaaattcctcgatgaa
cgcggcgtggtggtggaaaaaaccgggccgtataatctgcttttcctgttcagcatcggc
attgataaaaccaaatccatgagcctgatgcgcgggttgaccgatttcaaacgcagttac
gatctcaatctgcgcatcaaaaatatgctgccggacctgtacgcagaagatcctgatttt
tatcgcaatatgcgtatccaggatctggcacaagggatccacaaactgatcgtccgccat
gacctgccgcgtttaatgctggaagcgttcgatgtgttgccggaaatgaaaatgacgcca
tatgaaatgttccagcatcaggttcgtggtcatattgatgaatgcgacattgatgaactg
gtgggcaaagtatcagccaacatgatcctgccttatccccctggcgtgccggtggtgatg
ccgggtgagatgatcacggaggaaagccgcgcggtactcgatttcctgattatgctttgc
tcgatcggcgaacgttacccgggatttgatacggatattcatggaacccgtctcacagaa
gacgggcgctatctggtgaaagtcttaaaacttccggaagccagctaa
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