KEGG   Rahnella victoriana: J9880_12750
Entry
J9880_12750       CDS       T07871                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rvc  Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rvc02048]
    J9880_12750
Enzymes [BR:rvc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     J9880_12750
Prokaryotic defense system [BR:rvc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   J9880_12750
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD HTH_28
Other DBs
NCBI-ProteinID: UHM89201
LinkDB
Position
2735948..2739196
AA seq 1082 aa
MMSDPTKERIFQDEMISQLCENGWISGKPDGYDRQRALYLQDVLTFVQTTQPKAWEKLAR
VYPQDTERHFLDALLTQLNKADINATDKLSRTYGTLGVLRHGLKIRNADFSLCQFKPEHG
LNPETLARYRQNICRVVLELVYSPYASAEHFAASGVKAKRWRIDLVLFVNGLPVATLELK
SEFKQTVQSAVAQYKDTRLPKDPATKKPEPLLTFKRGALVHFAVSQHDVFMTTRLAGKET
YFLPFNKGTAEGGKGNPTPADQTRYATDYLWNEVLLPANLLTILGSYVHLQIEEKEDWQG
LKYKKETLIFPRYHQWDVVNKLVRAAVQEGCGHKYLIQHSAGSGKSNSIAWTAHQLSTLY
AADGQKQFHSVIVVTDRTVLDDQLQDTIYQFEHADGVVGRINNKTGDGSKADKLAAALEN
SQPIIIVTIQTFPHVLKAIENSLSLKQRQYAIIADEAHSSQSGSTARQLKEVLMLENTGD
DVELSSEDIMDATMVARRGSNNLNYYAFTATPKAKTLELFGRLPNPNEPASKTNRPQAFH
VYSMRQAIEEGFILDVLKNYVTYHVAYKLAQKQADADKEVDDKKANRRLTQWVRLHDYNI
AQKVKVIVEHYKNHVMNLLGGQAKAMVVTRSRKEAVRYKLAFDKYIHQNHYQKISAMVAF
SGEVEFSENDPNSEAQLGQKYTETNMNPGLKGRDMRKAFDSDDYQVMLVANKFQTGFDQP
KLCAMYVDKPLGGVECVQTLSRLNRIYPVKAASGTFILDFVNDPDDILQAFRPYYQTAEL
TDVSDPALVFELFEKLRTSGIFQWREVEQFCTAFFSKNKSGAALSNISRPAVERWEKRYA
SATEAYLQSKRMFEITKTTREPILIANAENTFKECKREKDRLEIFKKDLGSFVRFYEFIS
QIVDYDNQDLEKLSLFARHLRPLLRESNVQEDDVDLQNVVMSHYRLSKMREQQLRLTAAS
AEEGLQPGNDVGSAKPKDKKEDFMSQILERLNALFVGDHLTDKDMINCAFTVKDKISENT
AVMTQLANNTREQAMLGDFPKAVDEAIMDCNAAQQNMMMQYLSNPALAKGFAQVVFDMLK
AG
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgatgtcggatccgaccaaagagcggatttttcaggatgaaatgatctcgcagctttgc
gaaaacggctggatcagcggtaaaccggacggttacgatcgccagcgggcgctgtatctt
caggacgttctgacctttgtgcagaccacgcagccgaaagcgtgggagaagctggcgcgg
gtgtatccgcaggataccgaacgtcatttcctggatgcattgctgacgcagctgaacaaa
gccgacattaatgccacggataaactttcccgcacttatggcacgctcggcgttctgcgt
catggattgaagatccgtaatgcggatttctccctctgtcagttcaaacccgagcacggc
ctgaacccggagacgctggcgcgctaccggcagaatatctgccgcgtggtgctggaactg
gtgtacagcccctatgccagcgcggagcatttcgcggcaagcggggtgaaagccaaacgc
tggcgtatcgatctggtgttattcgtcaacggtttgccggtcgccacgctggaactcaaa
tctgagttcaaacagacggtgcaaagtgcggtcgctcagtacaaagacacccgtctgccg
aaagatccggcgaccaaaaaaccggagccgttactgactttcaagcgcggggcgctggtg
cattttgctgtcagtcagcacgacgtgtttatgaccacccggctggcgggcaaagagacg
tattttctgccgtttaacaaaggcacagcggaaggcgggaagggcaatccgacgcccgcc
gaccagacccgttacgccacggattatctgtggaatgaagtgttgctgcccgccaatctg
ctgaccattctgggcagttatgtgcatctgcaaatcgaagaaaaagaagactggcagggg
ctgaaatacaagaaagagacgctgatattcccgcgctatcaccagtgggatgtggtgaat
aaactggtgcgcgccgcagtgcaggaaggctgcgggcataaatacctgatccagcacagc
gccggatccggcaaatccaactcgattgcctggacggcgcatcagctttcgacgctgtat
gccgcagacggacaaaagcagtttcactcggtgatcgtggtgaccgaccgcacggtgctg
gacgatcagcttcaggacaccatttaccagttcgaacatgccgacggcgtggtcgggcgc
atcaataacaaaaccggtgacggctcgaaagccgataaactggcggcggcgctggaaaac
tcgcagccgatcatcatcgtcaccatccagaccttcccgcatgtgctgaaagcgatcgaa
aacagcctgagcctgaaacaacgccagtacgcgatcattgccgatgaggcgcactcttcg
caaagcggttcgaccgcgcgccagctgaaagaagtactgatgctggagaacaccggcgac
gacgttgagttgtcctccgaagacatcatggacgccaccatggttgcccggcgcggcagc
aataatctcaactattacgccttcacagccacgccgaaagccaaaacgctggagttgttt
ggccgtcttcccaacccgaacgaaccggcatcgaaaaccaaccggccgcaggcgtttcat
gtgtattccatgcggcaggccatcgaagagggctttattctcgatgtgctgaaaaattac
gtcacttatcatgtggcctacaaactggcgcagaaacaggcggatgccgacaaagaagtc
gatgacaaaaaggccaacagacgcctgactcagtgggtgcggctgcacgattacaacatc
gcgcagaaagtgaaagtgattgtcgagcactataaaaaccacgtgatgaacctgctcggc
ggccaggccaaagccatggtggtcacccgttcgcgcaaggaagcggtgcgttacaaactg
gcgttcgataagtacattcaccagaatcattaccagaaaatcagcgccatggtggcgttt
tccggtgaagtggaattcagcgaaaacgacccgaacagcgaggcgcagctggggcagaaa
tacacagaaaccaacatgaaccccggcctgaaggggcgtgatatgcgcaaagctttcgac
agcgacgactatcaggtgatgctggtggcgaacaaattccagaccggatttgaccagcca
aaactgtgtgccatgtatgtcgataaaccgctcggcggcgtcgaatgtgtgcagacacta
tcgcgcctgaaccgtatatatcccgtcaaagcggcatccggcacctttattctcgatttt
gtgaatgacccggatgacatcctgcaagccttccggccctattatcagaccgctgaactg
acggatgtgtctgacccggcgctggtgtttgagctgtttgaaaaactgcgtaccagcggg
atttttcaatggcgtgaagtcgaacagttctgcaccgcctttttcagtaaaaacaaatct
ggcgcggcactgagcaatatcagccgaccggccgtggaacgctgggaaaaacgctatgct
tcggcgactgaagcctatctgcaatccaaacgcatgttcgagatcaccaaaacgacccgc
gagccgatattaatcgccaatgcagaaaacacctttaaagaatgcaaaagggaaaaagac
cggctggaaattttcaaaaaagatctcggcagctttgtgcgcttttatgaattcatttcg
cagatcgtcgattacgacaatcaggatctggagaaactcagcctgttcgcacggcatctg
cgcccgctgctgcgcgaatcaaacgtgcaggaagacgacgtggatttgcagaatgtggtg
atgagccattaccgcctgtcgaaaatgcgcgaacagcaactgcgcctcaccgcggccagt
gcggaagagggtttgcagcccggtaacgacgtcggatcggcgaaacctaaagacaaaaaa
gaagactttatgtcgcaaatccttgaacgtctgaatgcgctttttgtcggtgaccatctg
acggataaagatatgatcaactgtgctttcacagttaaagacaagatctcagaaaacacg
gctgtcatgacgcagcttgctaataacacccgtgaacaagcgatgttaggcgattttcca
aaagctgttgatgaggccatcatggactgcaatgcagctcagcaaaatatgatgatgcag
tatctttccaatcccgcactcgccaaaggctttgcgcaggtggtgtttgatatgctgaaa
gcagggtga

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