Rahnella victoriana: J9880_13860
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Entry
J9880_13860 CDS
T07871
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00071
Fatty acid degradation
rvc00280
Valine, leucine and isoleucine degradation
rvc00310
Lysine degradation
rvc00362
Benzoate degradation
rvc00380
Tryptophan metabolism
rvc00410
beta-Alanine metabolism
rvc00640
Propanoate metabolism
rvc00650
Butanoate metabolism
rvc00907
Pinene, camphor and geraniol degradation
rvc00930
Caprolactam degradation
rvc01100
Metabolic pathways
rvc01110
Biosynthesis of secondary metabolites
rvc01120
Microbial metabolism in diverse environments
rvc01200
Carbon metabolism
rvc01212
Fatty acid metabolism
Module
rvc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
J9880_13860 (fadJ)
00650 Butanoate metabolism
J9880_13860 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
J9880_13860 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
J9880_13860 (fadJ)
00310 Lysine degradation
J9880_13860 (fadJ)
00380 Tryptophan metabolism
J9880_13860 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
J9880_13860 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
J9880_13860 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
J9880_13860 (fadJ)
00930 Caprolactam degradation
J9880_13860 (fadJ)
Enzymes [BR:
rvc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
J9880_13860 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
J9880_13860 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
J9880_13860 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UHM89403
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All DBs
Position
2968655..2970844
Genome browser
AA seq
729 aa
AA seq
DB search
MENRQPAETEATEPVSAFSLMFTAEHIGIITIDVPGEKVNTLKAEFAQQICAILQKAQQY
PNLKGLVLISGKPDSFIAGADITMISGCRTAAEASELAQKGQTVMSHIASFSVPVVAAIH
GACLGGGLELALACHSRVCSLDDKTQLGLPEVQLGLLPGSGGTQRLPRLIGAPKALELML
TGRSVRAKQALRMGLVDDAVPYSILLQTALERVAKGRKSRPPLPWQARLAGGPLGKSVLF
HLVRKQTRAKTHGNYPATEKIIDVVRTGLDQGSGNGYQAEANAFGELVMTPESAALRGLF
FASTALKKEKGGDAEPLPVRRVGILGGGLMGGGIANVTATKAGLPVRIKDINHEGIRHAL
KYSWDLLEKKVRRRRLTRNEQQRQMMLISGTTDYSGFARIDIVVEAVFEDLSLKQSMVAE
IEQNAAPHTIFASNTSSLPIHRIAEQAARPEQVIGLHYFSPVDKMPLVEVIPHAGTSAQT
ISTTVALAKKQGKTAIVVGDSAGFYVNRILAPYINEAARCLLAGEPVDHIDSALVNFGFP
VGPVQLLDEVGIDVGTKIVPILEEAFGERFAAPSGFDAVLKDDRKGRKNGKGFYLYSQKG
RAAKKKQVDPSVYRLLNVTPKAQQPEEEIARRCVMLMLNEAVRCLDENVIRSARDGDLGA
VFGIGFPPFRGGPFRYIESLGVANVVKTLEQLAQQYGERFAPCEGLLRRAEQGEGFCSAR
EAREKVSEV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccgacaacccgcagaaaccgaagcgactgaaccggtttccgctttctcactg
atgtttaccgcagaacatatcggcatcatcactattgatgttccgggcgaaaaggtgaac
accttaaaggctgaatttgctcagcaaatttgcgccattttgcaaaaagcgcagcagtat
ccgaatctgaaaggtctggtgctgatttccggcaagccggactcgtttattgccggtgcc
gatatcaccatgatttccggttgcaggacggccgccgaagccagtgaactggcgcagaaa
ggtcagacggtgatgtcgcacattgcctcattttctgtgccggtggtggcggccattcac
ggtgcctgtctgggcggcggactggagctggcgctggcctgtcattcccgcgtgtgctcg
ctggatgacaaaacccaacttggtctgccggaagtgcaactgggtttactgccgggttcc
ggcggcacgcagcgccttccgcgtctgatcggcgcgccaaaagcgctggagctgatgctg
accggtcgcagcgttcgcgccaaacaggcgctgcggatggggctggtggatgatgccgtt
ccttactctattttgctgcaaacggcgctggagcgtgtcgcgaaggggcgtaaatcgcgt
ccgccattaccgtggcaggcgcggctggcaggggggccgctgggcaaaagcgtgctgttc
catttagtgcgtaaacagacacgggcgaaaacccacggcaattacccggccaccgaaaaa
atcattgatgtggtaagaaccgggctggatcagggcagcggtaacggctatcaggccgaa
gccaacgcgtttggcgaactggtgatgacgccggaatccgccgcgttgcgcgggctgttt
tttgcttctactgcgctgaagaaagaaaagggcggagacgccgaacccctgccggtgcgc
cgtgtgggcattctcggcggcggcctgatgggcggcggtatcgccaacgtgaccgccacc
aaagccggtctgccggtgcgcatcaaagacattaatcacgaaggcatccgccatgcgctg
aaatacagctgggatctgctggagaaaaaagtgcgtcgccgcaggctgacccgcaacgag
cagcagcgtcagatgatgctgatttccggcaccaccgattacagcgggtttgcgcgcatc
gatatcgtggtggaagccgtatttgaggacttgtcactcaagcaatcaatggtggcagaa
atcgaacaaaatgccgcgccgcacacaatttttgcctcaaacacctcttccctgccgatc
catcgcatcgcagagcaggccgccagacccgaacaggtcattggtctgcactatttcagc
ccggtggataaaatgccgctggtggaggtgatcccccacgcaggcaccagcgcacagacg
atttccaccaccgtggcgctggcgaagaaacaggggaaaacagcgattgtggtgggcgac
agcgccggattctatgtaaaccgtattcttgctccttatatcaatgaggcggcccgttgc
ctgctggccggagaacctgtcgatcacattgacagcgcgctggtgaatttcggcttcccg
gtcggaccggttcagttactggatgaagtcgggattgatgtcggcaccaaaatcgtaccc
attctggaagaggcgtttggtgagcggtttgccgcaccgtccggctttgatgcggtgctt
aaagacgaccgcaaagggcgtaaaaacggcaaaggtttctacctttacagccagaaagga
cgggcggcgaagaaaaaacaggtcgatccgtcggtctatcgcctgctgaatgtcacgcca
aaagcgcagcaaccggaagaagagatcgcccgccgctgcgtgatgctgatgctcaacgaa
gcggtacgatgcctcgatgagaacgtgatccgcagtgcccgcgatggcgatctcggggct
gtgttcgggattggtttcccgccattccgcggtggcccgttccgttacatcgaatcgctg
ggtgtggccaatgtggtgaaaacccttgagcagctggcgcagcaatatggcgaacgtttt
gcgccctgcgaaggattattacgtcgcgcagagcagggggaaggattctgttcagcgcgc
gaggcacgcgaaaaggtcagtgaagtgtga
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