Rahnella victoriana: J9880_15530
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Entry
J9880_15530 CDS
T07871
Symbol
rlmI
Name
(GenBank) 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvc03009
]
J9880_15530 (rlmI)
Enzymes [BR:
rvc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
J9880_15530 (rlmI)
Ribosome biogenesis [BR:
rvc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J9880_15530 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_25
PrmA
PUA
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_15
TRM
Methyltransf_12
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
UHM89715
LinkDB
All DBs
Position
complement(3376505..3377698)
Genome browser
AA seq
397 aa
AA seq
DB search
MTARLILAKGREKSLLRRHPWVFSGAVARIEGKAHSGETIDIVDSQGKWLARGAYSPSSQ
IRARVWTFKQDEDIDIAFFIRRLQQAQSWRDYIAKRDGLDGYRLIAGESDCLPGITIDRF
QNFLVLQLLSAGAEYQRAPLIAALQHCYPECAIWDRSDVAVRKKEGLELTQGHVVGDEPP
ALLPIQEHGMSLLVDIKEGHKTGFYLDQRDSRLAARNYAAGRNVLNCFSYTGAFAVSALM
GGCTKVTNVDTSQAALDVARQNVELNKLDLSKAEFVREDVFQLLRKYRTEGQQFDMIVMD
PPKFVENKNQLASACRGYKDINMLALQLLRPGGILLSFSCSGLLPTDLFQKILADAALDA
GREIQFVEQFRQAADHPVTGAYPEGLYLKGFACLVMN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacgtttaattctggccaaaggccgtgaaaaatcacttcttcgtcgccacccg
tgggtgttttccggtgctgttgcacgcatcgaaggtaaagcccattccggcgagactata
gatattgtagacagtcagggaaaatggctggcacgcggtgcctattcgccgtcctcacag
atccgtgcgcgcgtctggacatttaagcaggatgaagacattgatatcgcgtttttcatc
cgtcgtttgcaacaggcgcagagctggcgagactatatcgctaaacgtgacggactggac
ggttatcgcctgattgccggtgaatccgactgcctgcccggtattactatcgatcgtttc
cagaattttctggtactgcaattgctgtcagccggtgcggaataccagcgtgctccgctg
atcgcagcgctgcaacattgttatccggagtgcgccatctgggatcgctctgatgtggcg
gtgcgtaaaaaagaaggtctggaactgacgcaaggccatgtggtgggtgacgagcctcct
gccctgttgcccattcaggaacacgggatgagcctgctggttgatatcaaagaaggccac
aaaaccggcttctatcttgatcagcgtgacagccgtcttgccgcacgcaattatgccgca
ggccgtaatgtcctcaactgcttctcctataccggtgcttttgctgtatcggcactgatg
ggcggctgtacaaaagtgaccaacgtggatacctcgcaggccgcactcgacgtggcccgc
cagaacgttgagctgaacaaactggacctgtcaaaagcggaattcgtgcgcgaagacgtc
ttccagttgctgcgtaaataccgcacggaaggtcagcagttcgacatgattgtgatggat
ccgccgaaattcgtggagaacaaaaatcagctggcaagcgcctgtcgcggctataaagat
atcaatatgctggcgctgcaactgttgcgtccgggcggtatcctgctcagcttctcctgc
tccggtctgttgccgaccgatctgttccagaaaattctggccgatgcggcgctggatgcg
ggccgtgaaatacagttcgtggagcagttccgtcaggcggctgaccatccggtgaccggc
gcctatcctgaagggttgtatctgaaaggttttgcctgcctggtcatgaactga
DBGET
integrated database retrieval system
