Rahnella victoriana: J9880_15980
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Entry
J9880_15980 CDS
T07871
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein
KO
K02058
simple sugar transport system substrate-binding protein
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvc02000
]
J9880_15980
Transporters [BR:
rvc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative simple sugar transporter
J9880_15980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
DUF4179
Motif
Other DBs
NCBI-ProteinID:
UHM89793
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All DBs
Position
complement(3471087..3472073)
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AA seq
328 aa
AA seq
DB search
MKFNLALVNACVVSACMLFTTPTFAAKPYDIAVVAKVTGIPWFTRMEVGVKEAAQKLDVN
AYQVGASTPDPAQQVKVIEDLIAKKVDAIIVVPNDAKVLEPVLKKARDQGIVVLTHESPD
QQIGQWDIETIDSQKYAQANMDELAKDMGGKGGYAIYVGSLTVPLHNAWADAAIKYQKEK
YPDMHEVTSRLPVAENIDKSYSTTLDLMKTYPDLKGIIGFGSLGPIGAGQAVQQKRAKNK
IAVVGIAMPAQAAPYLMRGDVKKVLLWDPKDAGYALVTVADQLLQGKEVTKDLSIEGLGK
ADVDMDKHVIRFNKILEVTPENAKSLGF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaacctcgcattagttaacgcatgtgtggtttcagcatgcatgttattcacg
acaccgacattcgccgccaagccttacgacatcgccgtcgtcgccaaagtcaccggcatt
ccctggttcacccgcatggaagtcggcgtaaaagaagccgcgcaaaaactggatgtgaat
gcctatcaggtcggtgcgtcaacgccggacccggcgcagcaggtcaaagtgattgaagat
ctcatcgccaaaaaagtcgatgccattatcgtggtgccgaacgatgccaaagtgctggag
ccggtgctgaaaaaagcccgcgatcagggcatcgtggtattaacccatgaatcgccggat
cagcagattggtcagtgggatatcgaaaccatcgacagccagaaatatgcgcaagcgaat
atggatgagctggcaaaagatatgggcggcaaaggcggttacgctatttatgtcggttcc
ctgaccgtgccgttgcataacgcctgggcagatgccgcgattaaatatcagaaagaaaaa
tacccggatatgcatgaagtcacttcacgcctgccggtggcagaaaacatcgataagtct
tactccaccacgctggatctgatgaaaacctatccagacctgaaagggattatcggtttc
ggctccctcggcccgatcggtgccggtcaggccgttcagcagaaacgggcgaaaaacaaa
atcgccgttgtgggtatcgccatgcctgctcaggctgcgccatacctgatgcgcggtgat
gtgaagaaagtgctgctgtgggatccgaaagatgccggttacgctttagtcaccgtcgcc
gaccagctgttgcagggtaaagaagtcaccaaagacctgagtatcgaaggtttaggcaaa
gctgatgtggacatggataaacacgtgattcgttttaataagattctggaagtcacacca
gagaatgcgaaatcactcggcttctga
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