Rahnella victoriana: J9880_16450
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Entry
J9880_16450 CDS
T07871
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J9880_16450 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvc01007
]
J9880_16450 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvc03016
]
J9880_16450 (aspS)
03029 Mitochondrial biogenesis [BR:
rvc03029
]
J9880_16450 (aspS)
Enzymes [BR:
rvc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
J9880_16450 (aspS)
Amino acid related enzymes [BR:
rvc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
J9880_16450 (aspS)
Transfer RNA biogenesis [BR:
rvc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
J9880_16450 (aspS)
Prokaryotic type
Other AARSs
J9880_16450 (aspS)
Mitochondrial biogenesis [BR:
rvc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
J9880_16450 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UHM89881
LinkDB
All DBs
Position
3549635..3551431
Genome browser
AA seq
598 aa
AA seq
DB search
MRTVYCGKLNASNVGQEVTLCGWVNRRRDLGGLIFIDMRDREGIVQVFFDPDQAEAYKLA
SELRNEFCIQLTGTVRARPESQFNKDMATGEVEVFASKLNIINRSESLPLDSNHVNTEEA
RLKYRYLDLRRPEMANRLKARAKITSFVRRFMDSHDFLDIETPMLTKATPEGARDYLVPS
RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMS
AEQVREVMEKLARELWQEVKGVDLGDFPIMTFAEAMRRYGSDKPDLRNPMEMVDVADLMK
NIEFKVFADPANDPKGRVAALRVPGGASLSRKQIDEYAKFIEIYGAKGLAYIKVNEVAKG
LEGIQSPVAKFLNEDLLSALIERTGAQDGDMIFFGAASAKIVTDAIGALRLKVGRDLKIT
KEDMWAPLWVIDFPMFEDTDEGGLSAMHHPFTAPKDMTAEELAANPVSAIANAYDMVING
YEVGGGSVRIHRSEMQQTVFSILGINEHEQREKFGFLLDALKYGTPPHAGLAFGLDRLVM
LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLLELGIAVVAKKEVTPDTNTENN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtatattgtggaaaactgaatgcgtccaatgtgggccaggaagtaacattg
tgtggctgggttaaccgtcgccgtgatttgggtggtttgattttcatcgatatgcgtgac
cgcgaaggcatcgttcaggttttcttcgaccccgatcaggcagaagcctacaaactggcg
tctgagctgcgtaacgagttctgcatccagttaaccggcaccgtgcgtgcgcgcccggaa
agccagttcaacaaagacatggcgaccggtgaagtggaagtgttcgccagcaagctgaac
atcatcaaccgctcagaatcgctgccgctggactccaaccacgtcaacaccgaagaagcg
cgtctgaaataccgctatctggatctgcgccgccctgaaatggcgaaccgcctgaaagcg
cgtgccaaaatcaccagcttcgtgcgtcgtttcatggacagccatgacttcctcgacatc
gaaaccccgatgctgaccaaagccacgccggaaggtgcgcgtgactatctggtgccaagc
cgtgtgcacaaaggcaagttctacgccttgccgcagtcccctcagctgttcaaacagctg
ctgatgatgtccggctttgaccgttattatcagatcgtaaaatgcttccgtgatgaagat
ttacgtgctgaccgtcagccagaatttacccagattgacgtggaaacatctttcatgagc
gccgaacaagtgcgtgaagtgatggagaaactggcccgcgaactgtggcaggaagtgaaa
ggtgtggatctgggcgacttcccgatcatgactttcgcagaagcaatgcgtcgttacggt
tccgataagccggacctgcgtaacccgatggaaatggtcgatgttgctgacctgatgaaa
aacatcgagttcaaagtgttcgccgatccggctaacgatccgaaaggccgcgtggccgca
ttgcgcgtgccaggcggggcttccctgagccgtaagcaaatcgacgaatacgctaaattc
atcgaaatctacggcgcgaaaggtctggcttacatcaaagtgaatgaagtcgcgaaaggc
ctggaaggtatccagagcccggtggcgaaattccttaatgaagacctgctgtcagcgctg
attgaacgcaccggcgcacaagacggcgacatgatcttcttcggcgcagccagcgccaag
atcgtgaccgacgcgattggcgcgctgcgtctgaaagttggccgtgacctgaaaatcacc
aaagaagacatgtgggctccgctgtgggtcatcgacttcccgatgtttgaagacaccgac
gaaggcggcctgagtgccatgcaccacccgttcactgcgccaaaagacatgaccgcagaa
gaactggcggcgaacccggtttccgctatcgcgaacgcctacgacatggtaatcaacggc
tacgaagtgggcggcggttctgtgcgtatccaccgcagcgaaatgcagcagaccgtgttc
agcattctggggattaacgagcacgaacagcgcgagaaattcggcttcctgctcgacgcc
ctgaaatacggcacgcctccgcatgccggtctggcatttggtctggatcgtctggtgatg
ttgctgaccggtacggataatatccgtgacgtgatcgccttcccgaaaaccaccgctgcg
gcgtgtctgatgaccgaagccccaagttttgccaatccggcatcactgctggagctgggc
attgcggtagtcgcgaaaaaagaagtgacaccagacacaaatacagagaataactaa
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