Rahnella victoriana: J9880_17070
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Entry
J9880_17070 CDS
T07871
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
rvc
Rahnella victoriana
Pathway
rvc02010
ABC transporters
rvc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J9880_17070 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9880_17070 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvc02000
]
J9880_17070 (lsrB)
Transporters [BR:
rvc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
J9880_17070 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
DUF6848
Motif
Other DBs
NCBI-ProteinID:
UHM92915
LinkDB
All DBs
Position
3686093..3687109
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AA seq
338 aa
AA seq
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MKAKTMKTLLIASAVSLACLSAQAAERIAFIPKLVGVGYFTSGGNGAMAAGKALGADVTY
DGPTEPSVSGQVQMINNFVNQGYNAIVVAAVSPDGLCPALKRAMQRGVKVLTWDSDTKPE
CRSIYINQGTPQQLGSMLVDMTSSQVTKEKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEH
PGWEIVTTQYGYNDATKSLQTAEGILKSYGDLDAIIAPDANALPAAAQAAENLKRTNVTI
VGFSTPNVMRPYVERGTVKQFGLWDVVSQGKISVYVADQLLKKGELNVGYKLDVPDVGPV
EVVPNSVQGYQYEAKGNGIVLLPERVVFTKDNIGKYDF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaaaacgatgaaaaccttattaattgccagtgccgtgagcctcgcctgcctg
agtgcgcaggcggctgaacgcatcgcgtttatcccaaaactggtgggcgtcggctatttc
accagcggcggcaatggtgccatggcggcgggtaaagcgctgggcgcggacgtgacctat
gacgggccgacggagccgagcgtgtccggtcaggtacagatgatcaataacttcgtcaat
cagggatacaacgcgattgtggtcgcggcggtatcgcctgacggcctgtgtccggcgctc
aagcgcgccatgcagcgtggcgtcaaagtgctgacctgggattctgacaccaaaccggaa
tgccgctcgatttacatcaatcagggcaccccgcaacagcttggctcgatgctggtggac
atgacctccagccaggtgacgaaagaaaaagccaaagtggcgttcttctattccagcccg
acggtgacggaccagaaccagtgggtgaaagaggcgaaagccaaaatcgccaaagagcat
ccgggctgggaaatcgtgaccacgcagtacggctataacgacgccaccaaatcactgcaa
accgccgaagggatcctgaaatcctatggcgatctggacgccattattgcgccggatgcc
aacgccttaccggctgctgcgcaggcggcggagaacctcaaacgcaccaacgtgaccatc
gtcggcttcagcacgccaaacgtgatgcgcccgtatgtcgaacgcggcacggtgaaacag
ttcggcctgtgggacgtggtcagtcagggcaaaatctcggtttacgtcgccgatcagtta
ctgaaaaaaggcgaacttaatgtgggttacaagctggacgtgccggacgtcggcccggtg
gaagtggtgccgaacagcgtgcagggctaccagtatgaggccaagggcaacggcattgtg
ttactgccggaacgcgtggtcttcaccaaagacaacatcggtaaatacgacttctga
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