Rahnella victoriana: J9880_17870
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Entry
J9880_17870 CDS
T07871
Symbol
ompC
Name
(GenBank) porin OmpC
KO
K09475
outer membrane pore protein C
Organism
rvc
Rahnella victoriana
Pathway
rvc01501
beta-Lactam resistance
rvc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J9880_17870 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J9880_17870 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvc02000
]
J9880_17870 (ompC)
Transporters [BR:
rvc02000
]
Other transporters
Pores ion channels [TC:
1
]
J9880_17870 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
UHM92927
LinkDB
All DBs
Position
3862272..3863396
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AA seq
374 aa
AA seq
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MKHKAIFLVMSSALLAGTAHAAEVFNKDGNKLDIYGLVSGEHYFSKDSSMDGDQTYVRLG
FRGETQISDNLTGYGQWQSQYDASSAESEDSTPRTRYGFAGLKFGDYGSFDYGRNRGVLY
DSLGFTDMQPEFDGMTYGSDQFMFSRANGVATYRDSGFYGLIDGLDIAIQYQGKNDGGGE
PGVRSVLRQNGDGYGMSATYNIGAGVSIVSAMSSADRTNEQNSRTNGIMGNGKRAEAYSG
AIKYDAHGVYLGAMYTQAYNASRFGSVSDDTAYGYANKSQIMELYASYQFDFGLQPFVAY
NVNKGKDLGRSASGRNYGDQDLIKYVDFGATYYFNKNINMFVDYMVNLVDENSFTREAGI
STDDVTAVGIVYQF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataaagcgatctttttagtgatgtcatccgcattacttgccggtacggcgcac
gcagcagaagttttcaataaagacggcaataaattagatatttacggtctggtgtccggc
gaacattatttctccaaagacagcagcatggatggcgaccagacctacgtccgtctgggt
tttcgtggtgaaacgcagatctctgacaatctgaccggttacggccagtggcagtcacag
tacgacgccagcagcgcagaaagtgaagattccacaccgcgcacccgttacggtttcgcg
ggtctgaaatttggtgattacggctccttcgactacggccgtaaccgtggcgtgctgtac
gattccttaggctttaccgacatgcagcctgagttcgacggcatgacttacggttctgac
cagttcatgttcagccgcgcaaacggtgtcgcgacttaccgtgacagcggtttctacggc
ctgattgatggtctggatattgcgattcagtatcagggtaaaaatgacggcggcggtgag
ccgggcgtgcgcagcgtattgcgtcagaacggcgacggttacggcatgtctgccacctac
aatattggcgcaggcgtcagcattgtcagtgccatgagcagcgctgaccgtaccaatgaa
caaaacagccgcacgaacggcatcatgggtaacggcaaacgtgccgaagcgtattccggt
gcgatcaagtatgacgcgcacggcgtgtatttaggcgcgatgtatacccaggcgtataat
gcgtcccgcttcggttctgtttctgatgatacggcgtacggttatgccaataaatctcag
atcatggaactgtacgccagctaccagtttgacttcggtctgcaaccgtttgtggcctat
aacgtcaacaaagggaaagatctgggccgttccgcctccggtcgtaattacggcgatcag
gatctgatcaaatatgtcgatttcggcgcgacgtattacttcaacaaaaacatcaatatg
tttgttgattacatggttaacctggtggatgaaaacagctttacccgtgaagccggtatc
agcaccgacgacgtgaccgcagtcggtattgtttatcagttctga
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