Rahnella victoriana: J9880_18470
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Entry
J9880_18470 CDS
T07871
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00500
Starch and sucrose metabolism
rvc01100
Metabolic pathways
rvc01110
Biosynthesis of secondary metabolites
Module
rvc_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
J9880_18470 (glgX)
Enzymes [BR:
rvc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
J9880_18470 (glgX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
UHM90261
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All DBs
Position
3999819..4002101
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AA seq
760 aa
AA seq
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MAKARSSKKSKPVVTTEETRTIPSHLQADIAVDEFGVRIIEPYSDGEIVRSFDSGHTTRV
REGLPVPLGATWDGLGVNFALFSANATKVELCLFNEDGEQYDVIELPEYTDEVWHGYLPD
ARPGLLYAYRVHGPYAPHDGHRFNPAKLLLDPYAKQIVGELKWDDALFAYDLQSPKKDLH
IDNSDSAPFLPKCRVIDPAFSWARARKRHIPWEKTLIYETHVRGYTMRHPAVPEHLRGTF
SGMSTPHIVDYIRSLGVTSVELMPVHAFTDDRHLQDKGLHNFWGYNTLSFFAPHPQYMAT
QTVNEFKQMIATLHAAGIEVILDVVYNHTAEGNELGPTLSFKGIDNASYYRLMPDNKRYY
INDTGTGNTLNLSHPRVLQMVTDSLRYWATEMQVDGFRFDLATILGRESYGFDEGCGFLD
TCRQDPILSQCKLIAEPWDCGPGGYQVGGFPPGWMEWNDRFRDTVRKFWRGDEGQLAQFV
TRLSGSADLFNHRGRKPYASVNFITAHDGFTLNDWVSYANKHNEANGENGKDGSDNNISA
NYGVEGPTDDPAINELRMRQMRNMLATLLFSQGTPMLLAGDEFGRSQNGNNNAYCQDTEI
AWVNWDIGKKGQSLLLFAYRLIALRKRFPILHRGRFLTGALHEKLGVKDVSWFQPQGQEM
SDAAWKDPHAKCIAMLLDGRAQPTGLVRQGSLSTVLLLFNASHEDVVFTLPSVAHGESWR
HIFDTFQPEDINEHNVEFGREYICTSRTVVLFELISSAKH
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcccgatccagcaagaaaagtaaacctgtcgtaacgacggaagaaacccgc
accattccgtcacatttacaggccgatattgcagtcgatgagtttggcgtgcgaattatt
gaaccttacagcgacggtgagattgtccgcagttttgattccggacacaccacgcgggtc
cgtgaaggcttaccggtgccgctgggtgccacctgggacgggctgggcgtgaattttgcg
ctgttttcagccaatgccaccaaggtggaactctgtctttttaacgaagacggcgaacag
tacgacgtgattgaactgccggaatataccgatgaagtctggcatggctatctgccggat
gcccgccccggtctgctgtatgcgtatcgcgtgcatggcccttatgcgccgcacgacggc
caccggtttaatcctgccaagttactgctcgacccttacgccaaacagattgtcggcgag
ctgaaatgggacgatgccctgttcgcctatgacctgcaaagcccgaagaaagatttgcac
attgataacagcgacagcgccccgtttctgcccaaatgccgtgttatcgatccggcattc
tcgtgggcgcgggcgcgcaaacggcatattccgtgggagaaaaccctgatttatgaaacg
catgtgcgcggctataccatgcgtcatccggcggtgcctgagcatttacgcggtacgttt
tccggcatgagtaccccgcatatcgtggactatatccgttcgctcggcgtcacctcggtg
gaactgatgcccgttcatgccttcaccgacgaccggcatttacaggacaaaggtctgcac
aatttctggggatacaacacgctgagtttcttcgcgccccatccgcaatatatggcgacg
cagacggtcaatgagtttaagcagatgattgccaccctgcacgcggcggggattgaggtg
attctggatgtggtttacaaccataccgctgaagggaatgagcttggcccgacgctctcc
ttcaaaggtatcgacaatgccagttattaccggctgatgcccgacaacaagcggtattac
atcaatgataccggcaccggcaatacgctgaacctcagtcatccgcgcgtcctgcagatg
gtcaccgactcgctgcgttactgggccaccgaaatgcaggtcgatggtttccgtttcgat
ctggcgaccattctcggacgtgaaagctacggctttgatgaaggttgcggtttcctcgac
acctgccgtcaggatccgatcctcagccagtgcaagctgatcgccgaaccctgggattgt
ggtcccggcggctatcaggtcgggggtttcccgccgggctggatggaatggaatgaccgc
ttccgcgacaccgtgcgtaagttctggcgcggcgatgaaggtcagctggcgcagtttgtc
acgcgcctttccggttctgcggatctgttcaatcatcgtggccgcaaaccttatgcttcc
gtgaattttattaccgcacacgacggttttacgctcaatgactgggtgtcgtatgccaat
aaacataacgaagcgaacggtgaaaacggcaaggacggcagtgataacaatatttcggcg
aactacggcgtggaaggcccgacggacgatccggccatcaatgaacttcgcatgcgtcag
atgcgcaatatgctggcgacactgctgttctcgcagggaacgcctatgttgcttgccggt
gatgaatttggccgctcgcaaaacggcaacaataacgcctactgtcaggacacggaaatt
gcctgggtcaactgggatatcggtaaaaaaggccagtcgcttttattgtttgcttaccgt
ctgattgccctgcgcaagcgttttcccatcttgcatcgcgggcgtttcctgaccggtgcc
ctgcatgaaaaactgggggtgaaagatgtcagctggttccagccgcaggggcaggaaatg
tctgacgcggcatggaaggatccgcacgccaaatgcattgcgatgttgctcgatggccgc
gcccagccaaccggtctggtgcgtcagggatcgttaagtacggtgctgctgctgttcaac
gcctcccacgaagatgtggtgttcaccctgccttcagtggcgcacggtgaaagctggcgg
catattttcgataccttccagccggaggacatcaacgagcacaacgttgagtttggtcgc
gaatatatctgcacgtcacgtaccgtggtgttatttgagctgatcagttccgcaaaacac
taa
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