KEGG   Rahnella victoriana: J9880_19080
Entry
J9880_19080       CDS       T07871                                 
Name
(GenBank) glycoside hydrolase family 78 protein
  KO
K05989  alpha-L-rhamnosidase [EC:3.2.1.40]
Organism
rvc  Rahnella victoriana
Pathway
rvc00946  Degradation of flavonoids
rvc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09100 Metabolism
  09110 Biosynthesis of other secondary metabolites
   00946 Degradation of flavonoids
    J9880_19080
Enzymes [BR:rvc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.40  alpha-L-rhamnosidase
     J9880_19080
SSDB
Motif
Pfam: Bac_rhamnosid6H Bac_rhamnosid_N Bac_rhamnosid Bac_rhamnosid_C fn3_4
Other DBs
NCBI-ProteinID: UHM90378
LinkDB
Position
complement(4149640..4152297)
AA seq 885 aa
MLAVIRVTLDQESALSGVQELPVLGWEIESDNRNVQQTAYRIQISHDHHFDPIIHHGEWQ
ETSRSNNLELTELMLTSSQRYFIRVQVRDNYGEVSPWSPPAHMISGVLYSHEWNAEFITA
ESPEDKDRSAAMLLRKSFVLNRAEDIQSAFIHVSALGLYELHLNGHQVGEDALTPGWTSY
HHHLRYQTYDLTGHLQNGENVIGAITGAGWYKGDMGFTRHRNYYGERAALISRLVINYKD
GSQDTVVSDESWKGHDSAILFSEIYDGEIYDARREIPGWCDRQGSAASWRPVSVVAHDKS
TLVAQGSNTVRQIEKLKPVALITTPQGDTVLDFGQNLSGWVEFKVRGNAGDKVVLRHFEV
LDAEGNVYLDNLRSAKQRTEYVLRGEGEEIWHPHFTWQGFRYVKVEEYPAELDRDNFTAI
VLHSAMQQTGHFACSDPDLNQLHHNILWGLKGNFVDVPTDCPQRDERLGWTGDAQIFCRT
ASYLMQTRNFFAKWLTDLRYDQTEDGGVPHVIPDILTGYCAKDRLLAQGGTHSASAWADA
AVINPWTMYLMYGDTRVLENQYASMKGWIDFMTAHADNHIWQYNLQFGDWVALDAKEGSY
FGATPNDLTCTAYYAYSTQLFAKAAKVLNRLEDHQHYEALHQAIVRRFQQEFFTPSGRLA
ARTQTAHILALYFNLVPEDFRQRTTDTLVELLNEHDGHLVTGFVGTPYFCHALSQNGRTK
EAWNLLLKDDFPSWLYQVKAGATTIWEHWDGIKPDGSMWSADMNSLNHYAYGAVGEWLYR
VAAGIEADEAQPGFKHFIIKPLTGGGLSWLDTRYQSIYGSIGVRWEVSGQTVFLNVTVPA
NTSATVILTDGQSVQEADGIDFVRCADGYTAEVGSGEYRVEYRLV
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgctcgcagtcatcagagttacattggatcaggaatccgctttgtcgggtgtgcaggaa
cttcctgttctgggttgggaaatagaaagcgataacagaaatgttcagcaaacggcgtat
cgtatccagataagccatgaccaccattttgaccccattattcatcatggcgaatggcag
gaaacctcccgttcaaataacctcgagctgaccgaattaatgctgacgtcttctcagcgt
tatttcatccgggttcaggtgcgggataattacggcgaagtcagtccgtggagtccgcct
gcacacatgatttccggcgtgctgtattcccatgaatggaacgcggaatttattacggca
gaatcgccggaagataaagatcgctccgcagccatgttattgcggaaatcttttgtcctg
aaccgcgccgaggatattcagtctgcgtttattcacgtcagtgcgctggggctttatgaa
ttacatctcaacggccatcaggtcggcgaagatgccctgactcccggctggacaagttat
caccaccatttgcgttatcagacttacgatctgaccggtcatctgcaaaacggcgagaat
gtcatcggcgcgataaccggcgctggctggtataaaggggatatgggctttacccgccac
agaaattattacggtgaacgggcggcgcttatttcacggctggtgattaattataaagac
ggttcgcaggacactgtggtcagcgatgaaagctggaaaggccacgattctgccattctg
ttttctgaaatctatgacggcgaaatttatgatgcccgcagggaaattcccggctggtgc
gacaggcagggttcagcggcatcatggcggccggtcagcgtggtggcgcatgacaaatcc
acgctggtcgcgcagggcagcaacactgtcagacaaatagaaaaactgaaaccagtcgcg
ctgatcaccacgccgcaaggcgacacggtcctcgacttcggccagaatttaagtggctgg
gtagaatttaaggtgcggggaaacgcaggcgataaagtggtgttgcgccactttgaagtg
ctggacgcagagggcaatgtttatctggataacctgcgttctgcgaaacagcggacggag
tacgtgctccggggcgagggcgaggaaatctggcatccgcactttacctggcagggtttc
cgttacgtgaaagtcgaggaatatccggcggagctggaccgggataatttcaccgccatt
gtgctgcattctgccatgcaacagaccgggcatttcgcctgttccgacccggatctgaac
cagttacatcacaacatcttgtgggggctgaaaggcaattttgtcgatgtgccgactgac
tgcccgcagcgcgatgagcgtctgggctggacgggcgatgcccagattttttgccgcacg
gcgagttatctgatgcagacgcgaaatttcttcgccaaatggctgaccgatcttcgttat
gatcagacggaggacggcggcgtgccccacgtcattcccgacatcctcaccggatattgc
gccaaagaccgtttgctggcccagggcggcactcactcggcatcggcctgggcagatgcg
gcggtgatcaacccgtggacgatgtacctgatgtacggtgacacccgggtgctggaaaat
cagtacgccagtatgaaggggtggatcgattttatgaccgcacacgctgacaaccatatc
tggcagtacaacttacagtttggtgactgggtggcgctggatgcaaaagagggcagttat
ttcggtgccacgcctaacgacctgacctgtacggcgtattacgcctattccacccagctg
tttgctaaagcggccaaagtactgaaccggctggaagatcatcagcattacgaggcgttg
catcaggcgattgtccgtcgttttcagcaggagtttttcacgccatccggtcgtctggcg
gcaagaacccaaaccgcgcacattctggcgctgtatttcaatctggtgccggaagatttc
cgccagcgcaccaccgacacgctggttgaattgctcaatgagcacgacggacatctggtc
accggtttcgtcggcacgccgtatttctgccatgcgctgagccagaacggacgcacgaag
gaagcgtggaatttactgctgaaagacgatttcccgtcatggctgtatcaggtgaaagcc
ggtgccaccaccatctgggaacactgggacggcatcaaaccggacggcagcatgtggagc
gcggacatgaactccctcaaccattacgcctatggcgcggtgggcgaatggctctaccgc
gtggccgcagggattgaagccgacgaggcgcagccgggattcaaacatttcatcatcaaa
ccgctgaccggcggcggcctgagctggctcgatacccgttatcagtcaatctacggcagt
attggcgtgcgctgggaagtcagcgggcagaccgtgttccttaacgtcacggttccggcg
aatacctccgccaccgtgatcctgacggacggtcaatctgtgcaggaagcagacgggatt
gattttgtgcgctgtgctgacgggtatacggctgaggtgggatcgggggaatatcgggtg
gaataccggttagtttag

KEGG   Rahnella victoriana: J9880_22610
Entry
J9880_22610       CDS       T07871                                 
Name
(GenBank) glycoside hydrolase family 78 protein
  KO
K05989  alpha-L-rhamnosidase [EC:3.2.1.40]
Organism
rvc  Rahnella victoriana
Pathway
rvc00946  Degradation of flavonoids
rvc01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09100 Metabolism
  09110 Biosynthesis of other secondary metabolites
   00946 Degradation of flavonoids
    J9880_22610
Enzymes [BR:rvc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.40  alpha-L-rhamnosidase
     J9880_22610
SSDB
Motif
Pfam: Bac_rhamnosid6H Bac_rhamnosid_C Bac_rhamnosid_N Bac_rhamnosid MGH1-like_GH DUF608 FAO_M
Other DBs
NCBI-ProteinID: UHM93466
LinkDB
Position
unnamed1:complement(277884..280649)
AA seq 921 aa
MYLYKISRFSPVMLMMLIPLNAHAVPQIQPSDLRLELQKQPLLVEDLNHFSMNWVLNSNQ
RNDIQTAYRIVISADADFIDAKGRIIYQKPFWDSGKVNTSDSSGVIYHGPQLSAATRYYW
AVQTWNRQNEASPFSSISHFDTALKNNWRAKPVWVAQRPDNNNQEDDWAFFRKEFRASNK
AIKRAIIYSTGTNPVESRQYVYKVNLNGDFVGLGPVRGFDGKTFYNAFDVTPHIKAGQEN
ILSASAFSYGDKKSFMAELRIDYADGDVQIIATDSSWKSLAGNKAFPYAGDVHDPEAISW
VGFRYPHENINVKEYPSGFQNIHFDDAKWQPVVIKPDLKNLVGYPAENLTKRNISPVSIK
KTTDNKFVLDYGVTVVGGMNLTIDTGDKGGGVVTIKAGEVMKDSQKVQWKTAALVNNNDV
WTLKNGPQSVEHFGFRVFRYAEVSGLPDFVTEKNLHNYLTTFTLQYPFDDQAASFRSSNE
QLNKIWAFSRDSIKNLNHDLYVDSPNRERAPYEADTYIQQLSNYSLSNDYALARFSVDWL
THNSTWPMEWKVYNILNSWNDYLYTGDRKLIERNFSLLQTKIPPKLLQGFSPKTGLVTAS
YGDGGPGPDHDIVDWPKKLRDGYQFSDTHIVTNVFFFAATKAMSDIAAALNKTQDSKKYV
ALYSKSRTGIQKTFFDRQHEAFRDNVNGELHFSSQANSFVTALGAASPTQSVNAANYLAE
QKMLKGSVYSSLFALTAMAEHGQAEEAVNQITGMNSDGVPRENSHNWRHMMELGSGSTME
AWNETDDFTVSHSHPWGTSPSIVIPESLFGIKPLEPGWAVFQVKPARAGLSNASVKVPTI
RGAVKVSYETVGTVLHLKVSVPVNTHAFIYIPADKMTAVKESGSALRTTQDNPEIVGVQD
GYLKVKVGSGDYNFTSELVRF
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgtatttgtataaaatatcgcgttttagccctgtaatgctgatgatgctcatcccttta
aacgcccatgcagtcccccagattcagccttctgatttgcggcttgaactgcaaaaacaa
cctcttctggtagaagatctcaatcatttttcaatgaactgggtgcttaacagcaaccag
cgtaatgatattcaaacagcttacagaatcgtgatatccgcggatgccgattttatagat
gcgaagggccgtattatttatcaaaaaccgttctgggactccggaaaagtgaacacatca
gattcgtcaggtgtgatttatcatgggcctcaactttccgcagcgacccgttattactgg
gcagtccagacatggaatcggcaaaacgaagcgagtcctttttcatccatcagtcatttt
gataccgcgcttaaaaataactggcgtgctaaacctgtctgggtcgcccaacgtccagac
aataataatcaggaagatgattgggcatttttccgtaaggaattccgggccagtaataaa
gccattaaacgcgcgattatttattcaaccggcacgaaccctgttgaatcccggcagtat
gtttataaagttaacttgaatggtgattttgtggggttgggtcctgtccggggcttcgat
ggtaaaacgttttataacgcttttgacgttacaccccatatcaaggcaggtcaggagaat
atcctttccgcatcagcgtttagctatggtgacaaaaagtcgtttatggcagaattgcgc
attgattacgccgatggcgatgtgcaaattattgcaacagatagctcatggaagtcgctg
gccgggaataaagcatttccgtacgctggggatgtgcatgaccctgaagccatttcatgg
gtgggattccgctatccccacgaaaatatcaatgtaaaagaatacccttctggttttcag
aacattcatttcgatgatgctaaatggcaacctgtggtcattaagcccgacctgaagaat
ttggtcggttatccggcagaaaacctgacgaaaagaaatatttctccggtaagcatcaaa
aaaacgactgacaataagtttgtgctcgattacggcgtcactgttgtgggtggtatgaat
ctcaccatcgatacgggggataaaggggggggagttgtcaccatcaaggccggagaggtc
atgaaagattcccaaaaagtgcaatggaaaacagccgctctggtcaataataacgatgtg
tggacactgaaaaacggccctcaatctgttgaacactttgggtttcgtgtcttcaggtat
gcagaggtttcaggactcccggactttgtcaccgaaaaaaatctccacaactatctgacg
acattcactttgcagtatccgtttgatgatcaggctgcatcgttccgttcctcaaatgag
caactcaacaaaatatgggctttttcacgtgactcaatcaaaaaccttaatcacgattta
tacgtggattcgccaaatcgagaacgcgctccctatgaggctgacacctacattcagcaa
ttaagtaattattccctcagcaacgattacgcccttgcccggttttctgtggactggctg
acccataattctacgtggccgatggaatggaaggtatataacattctcaattcctggaat
gattacctctatacgggtgatcgaaaactgattgagagaaatttcagcctgttgcaaacg
aaaatcccgcccaaactcttgcaaggatttagtccgaaaaccgggctggtcaccgccagc
tatggtgatggcggcccggggcccgatcatgacatcgtcgactggcccaaaaaactgaga
gacggatatcaattctcagacacgcatattgtgactaacgtattcttttttgcagcgaca
aaggcgatgtctgatattgctgccgcgttaaataagacgcaagacagtaaaaaatatgtg
gcgctctacagcaaatcccgcaccggtattcaaaaaacattctttgaccgccagcatgag
gcattcagagataatgtaaatggtgagctgcacttctcaagtcaggccaattcatttgtc
actgcactgggcgcagcatccccgacacaatcagtaaacgccgccaactaccttgctgaa
caaaaaatgcttaagggcagtgtctacagttctctgtttgcattgacagcaatggctgaa
catggtcaggcggaagaagcggttaatcagattaccggtatgaactcagatggggttccg
cgtgaaaacagccataactggcgacatatgatggaactgggttccggttcaacaatggaa
gcatggaatgagacggatgattttactgtgagtcactctcatccgtggggaacgtcacct
tctattgtcatccctgaaagtctcttcggcattaagccgctggagcctggctgggccgtg
tttcaggtgaaacccgcgcgtgcagggctgagcaatgcgtcggtgaaagtgcccactatc
cggggagccgtaaaagtgtcttatgaaacagtcggtaccgtattgcatctgaaagtgtct
gttccggtgaatactcacgccttcatctatattcctgcggataagatgacggctgtcaaa
gagagcggttctgcattgagaacaacgcaggacaatccagaaattgtgggtgtgcaagac
ggataccttaaagtgaaggttggctctggagattacaatttcacctccgaacttgtccga
ttttaa

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