Rahnella victoriana: J9880_19380
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Entry
J9880_19380 CDS
T07871
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00061
Fatty acid biosynthesis
rvc00071
Fatty acid degradation
rvc01100
Metabolic pathways
rvc01212
Fatty acid metabolism
rvc02024
Quorum sensing
rvc04146
Peroxisome
Module
rvc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
J9880_19380 (fadD)
00071 Fatty acid degradation
J9880_19380 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J9880_19380 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9880_19380 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rvc01004
]
J9880_19380 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvc04147
]
J9880_19380 (fadD)
Enzymes [BR:
rvc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
J9880_19380 (fadD)
Lipid biosynthesis proteins [BR:
rvc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
J9880_19380 (fadD)
Exosome [BR:
rvc04147
]
Exosomal proteins
Exosomal proteins of breast milk
J9880_19380 (fadD)
Exosomal proteins of breast cancer cells
J9880_19380 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UHM90434
LinkDB
All DBs
Position
complement(4214978..4216675)
Genome browser
AA seq
565 aa
AA seq
DB search
MEKVWLKRYPADVPENIDPDRYSSLVEMFENATLRYADTPAFINMGEVMTYRKLEERSRA
FAAYLQNELGLQKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVYKTQVKHVILTRMGDQLSAAKGTLVNFVVKYVKRLVPKYHL
PNAISFRTALQRGRRLQYIKPDIINDDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA
AYAPLLQPGHELVVTALPLYHIFALTVNCLLFLELGGKSLLITNPRDVPGMVKELGKYPF
TAISGVNTLFNALLNNEDFRELDFSTLRLSVGGGMSVQKSVAEKWEKLTGKHLLEGYGLT
ECSPLVAGNPYDLKHYSGSIGLPVPSTEVRLVDDNGQDVGPGLPGELWVRGPQVMLGYWQ
RPAATDEVLKDGWLSTGDIVTVDEQGFLRIVDRKKDMILVSGFNVYPNEIEEVVSQHDKV
LEVAAIGVPNESSGEIVKICVVKKDPSLTSEEILAHCRRLLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQAKPKADPKQDAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaggtttggctaaaacgttatccggcagatgttcccgagaacatcgatcccgac
cgctacagttcactggtcgaaatgtttgaaaatgccacgctgcgttatgcagataccccg
gcgtttatcaacatgggcgaggtgatgacttaccgcaagcttgaagagcgcagtcgcgct
ttcgctgcgtatttgcaaaatgaactgggtctgcaaaagggcgaccgcgttgccctgatg
atgccgaatctgctgcaatacccgattgccctgtttggcgtgctgcgcgccggtatggtg
gtggtcaacgtcaacccgctgtatacgccgcgtgaacttgagcatcagctcaatgacagc
ggtgcgagcgcgattgttatcgtctccaacttcgcccacaccctggaaaaagtggtgtac
aaaactcaggttaagcatgtgatcctgacccgtatgggcgatcagctttctgcagcgaaa
ggcacgctggttaactttgtggtcaaatatgtcaaacgactggtgcctaaataccatctg
ccgaatgccatttcgttccgtaccgccttacagcgcgggcgtcgtctgcagtacatcaaa
cccgacatcattaatgacgatctggcgtttctgcaatacaccggcgggacgactggcgtg
gcgaaaggcgcaatgctgacacaccgtaatatgcaggccaatctcgagcaggcaaaagcg
gcgtacgcgccgttgttgcagccggggcacgaactggtggttacggctctgccgctgtat
cacatttttgcattgacggtgaactgcctgctgttcctcgaactgggtgggaagagtctg
ctgatcaccaacccgcgcgatgtgccggggatggtgaaggagctgggtaaatacccgttt
acggcgatcagtggcgtcaatacgctgttcaatgcgttactcaataacgaagatttccgc
gagctggatttctccacgctgcgcctctcagttggcggcggaatgtcggtgcaaaaatcc
gtggccgaaaaatgggaaaaactgaccggtaaacatttactggaaggttacgggctgacc
gagtgttcaccgctggtcgccggtaacccgtatgacctgaaacattacagcggcagtatc
ggcttaccggtgccgtcaacagaggtacgtctggtcgatgataatggtcaggatgtcggg
ccgggattaccgggtgaactctgggtgcgcggtcctcaggtgatgctgggatactggcaa
cggcctgcggcgaccgacgaggtgctaaaagatggctggttatcgacaggcgatatcgtt
acagtggacgagcagggctttttacggattgttgaccgcaaaaaagacatgattctggtt
tccggttttaatgtctaccctaacgaaattgaagaggtggtttcacaacatgacaaagtg
ctcgaagttgccgccatcggtgtgccaaacgagtcgtcgggtgaaatcgtcaaaatttgc
gtggtgaagaaagacccgtcgctgaccagcgaagagatcctcgcgcattgccgccggtta
ttaaccggttacaaagtaccgaagattgtcgagttccgcgacgagttaccgaaatcaaat
gtcggtaaaattctcagaagggagcttcgtgacgagcaggcaaagccgaaggctgatccg
aaacaggatgcggcataa
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