KEGG   Rahnella victoriana: J9880_20275
Entry
J9880_20275       CDS       T07871                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rvc  Rahnella victoriana
Pathway
rvc00300  Lysine biosynthesis
rvc00470  D-Amino acid metabolism
rvc01100  Metabolic pathways
rvc01110  Biosynthesis of secondary metabolites
rvc01120  Microbial metabolism in diverse environments
rvc01230  Biosynthesis of amino acids
Module
rvc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    J9880_20275 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    J9880_20275 (dapF)
Enzymes [BR:rvc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     J9880_20275 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UHM90598
LinkDB
Position
4414939..4415778
AA seq 279 aa
MIFHRYHGLGNDYLVCHHSVAALLSNQQIQRVCDRHYGIGSDGLLIDDDGADIPSLRIIN
PDGSEAEKSGNGLRIYARYLFDIGRVTHEPFLVNTAGGQVRCEVTEGAHQVIVDMGQAKF
SPAALPATVEGDEALALPLVAGGHNLSATLVSMGNPHCVIRVEKLDLDLVRQLGAEIETL
AIFPKRTNVQFAQVIDRNTIRIGIWERGAGYTLASGSSSCAAASAMRKLGLVDDTVTVQM
PGGELAIRFSGDFQVNMRGPVQKIATLTLDNDCFRDMPA
NT seq 840 nt   +upstreamnt  +downstreamnt
atgatttttcaccgctatcacggactgggtaatgattatctggtctgccatcacagcgtc
gccgccctgctcagcaatcagcaaattcagcgcgtctgcgaccgccattacggcatcggt
tccgacggtctgctgatcgacgacgacggtgctgacattccctccctgcgcattattaat
cccgacggttcagaagctgagaaaagcggcaacggtctgcgtatttacgcccgctatctg
tttgatatcggacgggtcacgcatgaaccttttctggtgaacacggcgggcggacaggtg
cgctgcgaagtcaccgaaggtgcgcatcaggtgattgtggatatggggcaggcaaaattc
tcgccagccgcgttacccgctacggttgaaggcgatgaagccctcgcgttaccgctggtg
gctggcgggcacaatctcagcgcaacgctggtgtcgatgggcaatccgcactgtgtgatc
cgggtggaaaagctggatctggatctggtcaggcagctcggtgctgaaattgaaacgctg
gcgatttttccgaaacgtaccaacgtgcagttcgcgcaagtcattgatcgcaatactatc
cgcatcggcatctgggaacggggcgcggggtatacgctggcttccggcagcagcagttgt
gcggcggccagcgccatgcgcaaactcgggctggtggacgacaccgttaccgtgcagatg
cccggcggtgaactcgccatccgtttcagcggcgattttcaggtcaacatgcgcgggccg
gtgcagaaaatcgccacccttaccctcgataacgactgtttccgggatatgcccgcatag

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