Rahnella victoriana: J9880_20560
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Entry
J9880_20560 CDS
T07871
Symbol
livM
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter permease LivM
KO
K01998
branched-chain amino acid transport system permease protein
Organism
rvc
Rahnella victoriana
Pathway
rvc02010
ABC transporters
rvc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J9880_20560 (livM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J9880_20560 (livM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvc02000
]
J9880_20560 (livM)
Transporters [BR:
rvc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
J9880_20560 (livM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF3382
YqjK
Motif
Other DBs
NCBI-ProteinID:
UHM90647
LinkDB
All DBs
Position
complement(4469745..4471034)
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AA seq
429 aa
AA seq
DB search
MTTQTAVNSGFSLKRCVLDAVFAGLVALIIFGPVVGVVLDGYSFNFHTQRLVWIIAAVMV
GRFLLSAFLETAKGQKMRARFESDSAGVYVRPPDHKSNLRWIIPLLLVLAIFFPFVATKY
ILTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWSMLPL
AAVMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLTNWLSFTGGPNGVSAPPPTFF
GLEFGRRAKEGGVPFHEFFHLTYNPNMKFIFIYAVLVLVVLLVLFIKHRLTRMPIGRAWE
ALREDEIACRAMGLNHVLVKLSAFTLGASTAGIAGVFFATYQGFVNPTSFTFFESALILA
IVVLGGMGSTIGVVLAAFVLTVAPELLRSFAEYRVLLFGVLMVVMMIWRPRGLIRISRSG
FTVRKGVAP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacaaactgctgtaaacagcggcttttcactgaaacgctgtgtgctggatgct
gtttttgccgggctggtggcgctgattattttcgggccggtggtcggcgtggtgcttgat
ggctacagctttaacttccacacgcagcggctggtatggattattgccgcggtgatggtg
gggcgttttctgctcagtgcctttttagaaacggcgaagggacagaaaatgcgggcgcgt
ttcgaatcggacagcgcaggcgtgtatgtccggccaccggatcacaaaagcaatttgcgc
tggattatcccgctgctgctggtgctggcgattttcttcccgttcgtcgccaccaaatac
attctgaccgtcgcgatattggggctgatttatgtgctgctcggactcggcctgaatatc
gtggtcggtctggccggtttgctcgatctggggtacgtggcgttctacgccatcggggct
tacgggctggcgctcgggtatcagtatctcggcctcggcttctggtcgatgctgccgctg
gcggcggtgatggcggcgctggccggggctttgctcggtttccctgtgctgcgcatgcac
ggcgattatctggcgattgtgaccctcggtttcggggagatcatccgtctggtgctgacc
aattggctgtcgttcaccggcgggcctaacggcgtgtccgcgccgccgccgacctttttc
gggctggaattcggcaggcgggcaaaagagggcggcgtaccttttcacgagtttttccac
ctcacctataacccgaatatgaagtttatcttcatctacgccgtgctggttctggtggtg
ttgctggtgctgtttattaaacaccgtctgacccgtatgccgatcgggcgggcgtgggaa
gcactgcgggaagatgaaattgcctgtcgcgcgatggggctgaatcatgtgctggtcaaa
ctgtcggcattcaccctcggggcctctaccgccggtattgcgggcgtgtttttcgccacc
tatcagggattcgtgaatccgacctcatttaccttttttgaatccgcgctgatcctggcg
attgtggtgctgggcggcatgggctcgaccatcggcgtggtgctggcagcatttgtgctg
accgtggcaccggaactgttgcgcagctttgctgaataccgcgtcctgttgtttggcgtc
ctgatggtggtgatgatgatctggcgaccacgcgggttgatccgcatcagccgcagcggg
tttaccgtgcgtaagggagtcgcgccatga
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