Rahnella victoriana: J9880_21015
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Entry
J9880_21015 CDS
T07871
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J9880_21015 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvc01007
]
J9880_21015 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvc03016
]
J9880_21015 (pheT)
Enzymes [BR:
rvc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
J9880_21015 (pheT)
Amino acid related enzymes [BR:
rvc01007
]
Aminoacyl-tRNA synthetase
Class II (U)
J9880_21015 (pheT)
Transfer RNA biogenesis [BR:
rvc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
J9880_21015 (pheT)
Prokaryotic type
J9880_21015 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
UHM90730
LinkDB
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Position
complement(4567205..4569592)
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AA seq
795 aa
AA seq
DB search
MKFSELWLREWVNPAISSEALSDQITMAGLEVDGVDPVAGAFTGVVVGEVVECGQHPNAD
KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLPGDFKIKAAKLRGEPSEGMLC
SFSELGISEDHDGIIELPLDASVGTDIREFLKLDDTTIEISVTPNRADCLGILGVARDVA
VINQLPLVEPEINPVKATVDATISIDVQAPQACPRYLGRVVKGINVKAPTPLWMREKLRR
CGTRSIDAVVDITNYVLLELGQPMHAFDLNRIQGGIVVRMAQQGEPLTLLDGTQAKLNED
TLVIADHEKALAMAGIFGGEHSGVNDETQDVLLESAFFAPLSITGRARRQGLHTDASHRY
ERGVDPQLQYKAIERATALLLSICGGEAGPVIDASSEEHLPKAATITLRREKLDRLIGHH
VEDAQVTDILTRLGCQVQHHGDHWVAVAPSWRFDMQIEEDLVEEVARVYGYNNIPDVPVK
ASLVMTKHREANLSLKRVKNLLVDRGFQEAITYSFVDPKVQALLHPGEEALILPRPISVE
MSAMRLSLWSGLLTAVVNNQNRQQSRVRLFESGLRFVPDTQADLGIRQDVMLSGVISGTK
NEEHWDLARQAVDYYDLKGDLEAILELTGKMNDVQFKVEANPALHPGQSAAIYLRGERIG
FIGVVHPELERKLDLNGRTVVFELLWNKVADRVLPDAKEISRFPANRRDIAVVVAENVPA
DDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISLVLQDTGRTLEEEEIAATVAK
CVEALKQRFQASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaactctggttgcgtgaatgggtaaacccagccatcagcagcgaagca
ttatcagaccaaatcaccatggccggccttgaagtcgatggcgtggatccggttgccggc
gcatttactggcgtcgttgtcggtgaagttgtcgaatgtggtcagcacccgaacgcagac
aaactgcgtgtcaccaaagtgaatgtgggcggcgatcgcctgctggacatcgtgtgtggc
gcaccaaactgccgtcagggcctgaaagtggcggttgccactgtgggggctgtcttgccg
ggtgatttcaaaatcaaagccgctaagctgcgtggcgagccttcagaaggcatgctgtgc
tccttctctgagctgggtatttcagaagatcacgacggtattatcgaattaccgctggat
gcatccgtcggtacggatatccgcgaattcctgaaactggatgacaccaccattgaaatc
agcgtgacgccaaaccgtgctgattgtctggggatcctcggcgtggcacgtgatgttgcg
gtgattaatcagttgccgctggtcgagccggaaatcaatccggtgaaagccaccgttgat
gccacaatctccattgatgtgcaggcgccacaggcgtgtccgcgttatctgggccgtgtt
gtcaaaggcatcaacgttaaggcgcctacaccactgtggatgcgtgaaaagctgcgtcgt
tgtggcacccgctctattgatgcggtggtggatatcaccaactacgtgctgctcgaactc
ggtcagccaatgcatgcgttcgacctgaaccgcatccagggtggcatcgttgtgcgtatg
gcacagcagggcgaaccgctgaccctgcttgacggcacgcaggcgaaactgaacgaagat
acgctggttatcgctgaccatgaaaaagcactggcgatggccggtatctttggcggcgaa
cattccggtgtgaacgatgaaacgcaggatgttctgctggagtctgcgttcttcgcgcca
ctttccattactggccgcgcacgccgtcaggggctgcacaccgacgcctcacatcgctat
gagcgtggtgttgacccgcaactgcaatacaaggctatcgagcgcgctaccgcgctgttg
ctgagcatttgtggtggtgaagccggtccggtgattgatgcatcttctgaagagcatctg
ccgaaagcggcgaccatcacgctgcgtcgtgaaaagctggatcgcctgatcgggcatcac
gttgaagatgcacaggtcacggacattctgacccgtctgggctgccaggttcagcatcac
ggcgatcactgggtggctgtggcaccgagctggcgtttcgatatgcaaatcgaagaagat
ttggtggaagaagtggcccgcgtttacggctacaacaacattcctgatgtgccggtgaaa
gccagtctggtgatgactaaacaccgcgaagcgaatctgtcgctgaaacgtgtgaaaaat
ctgttggttgaccgcggtttccaggaagcgattacctacagttttgtcgatccaaaagtg
caggctctgctgcatcctggcgaagaagcgctgattctgcctcgcccgatctcggtagaa
atgtccgccatgcgtctttccctgtggtcaggtctgctgactgcggtggtaaataaccag
aatcgtcagcaaagtcgcgtgcgtttatttgaaagcggcctgcgctttgtccctgataca
caagccgatttgggtatccgtcaggacgtcatgctgtctggtgtgatctccggcacgaaa
aatgaagagcattgggatctggcgcgtcaggcagttgactactacgatttgaaaggtgat
cttgaggctattcttgagcttaccggcaaaatgaacgatgtacagttcaaggtggaagcg
aatcctgcgttgcaccctgggcagagcgcagctatttatttacgcggcgaacgtattggt
ttcattggtgtagtccaccctgagctggaacgtaaactcgatcttaatggtcgtactgtg
gtcttcgaactgttatggaataaggttgcagaccgcgtactgcctgatgcgaaagagatt
tctcgcttcccggcgaaccgtcgtgacatcgctgttgtagtcgccgaaaacgtgcccgca
gacgatattttggcagagtgcaagaaagttggcgcaaatcaggtagttggcgtaaacttg
tttgatgtgtaccgtggcaagggcgtagctgagggttacaagagcctggctatcagtctg
gtgttgcaggataccggccgtacactggaagaagaggagatcgccgctaccgttgcaaaa
tgtgtagaggctctaaaacagcgattccaagcatccttgagggattga
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