KEGG   Rahnella victoriana: J9880_21645
Entry
J9880_21645       CDS       T07871                                 
Name
(GenBank) type VI secretion system protein
  KO
K11891  type VI secretion system protein ImpL
Organism
rvc  Rahnella victoriana
Pathway
rvc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    J9880_21645
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rvc02044]
    J9880_21645
Secretion system [BR:rvc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   J9880_21645
SSDB
Motif
Pfam: IcmF-related_N
Other DBs
NCBI-ProteinID: UHM93293
LinkDB
Position
unnamed1:32799..36236
AA seq 1145 aa
MFKKLVSFAAWALFLCLLLIVCVVMSVFLERSLLHAFALWLIVIIAVLLVRFVWGSVSGI
AQAKYISGLKAKFKLTRLEYVLFEHWKTGAAVIKRIRRRKQPIPWFVLTGGRSGKTTLMA
GAGLPLFSNEPESSLVVPTRTLRWWFFRSAGFLDLSSQFLNKTPAFERGWLRLVNWCGRL
PAPAGIVVCVSVSELLEKDDADLHLHARHIRTQIEPLVSKVKRRLPVYLFITCCDRMPGF
SHWTRQLSAAQRQQPLGYYWRSSPIVDGKDPALLDPLFRCVKDGLDKVRVSMLSGGEPDA
NTLALMDFPEQLPQLQPALQRYLAALCEPDAYFQPAALGGIWFTATEPVSKNSASRQAFF
IHELMTRLLPTLSRQREVEPVGFGRRYLHKWGAMTFSALAITYLLIAGYFTGRLTAGTPA
LMETTAQVQQIENIEGWRRHPLHYLPFVPVLHHRHEQLEASIIAMTPRDTVNLRETADHY
QQQFTDAVPEQKRALILDLARTLITKQAMWEKQPVSELLTQPPVPAALSMTGATVPLSRQ
QDVVLQRALIQQPGGRKQLVVLRELLGRLVNSDPQMVWLLAPSEELTPVNLTDFLPLSED
KTQVSCLWTKQGTAQIQGWLDEIRRAGDEQVPMPELAAFEQRWPALRQTQWMTMMLAMNQ
QPAPVLSGEQWQTALIALDQGHSQSMKFARYVSEQLDDIRAQDAALWLRELRRLNQLQAM
PVPGALVPRISKIQQSIQKKMSALLKIDSKTLTPVLSDLNVKNWNAWKASVHAAVSDVFA
TPKSSDRLTRGLFQTGAAGDSNPLQLLDSRFNVLRKSLSAERDDFATNAVWTLYQSDAHW
LVAQAMQRSACWLEQQWQSRVLWPMENNASRLEYDDQQDQAWQYLSDFIRGPAKSVLVVG
DGGPRAGEFNGHTPGLTPEFLRMVNHVLRPDDVLAMPERENTRDDDALAALKEEQADLEA
QMAALEAKPLELTLKSLPATIPGGARLMPTGTGLTLFCDEQQWKLNSMNFSEQAAFRWRP
GHCSRATLVIKFPGFDLTYEYFGDAAWPDFLHDIADGQHRFKAEDFPDEAAQLAALGISE
VMVRYQVGSQNAIQDNWHQWQERRQALNDNAVAQQETGTKKAEKQRPTALRSAFSQLPVR
ITECH
NT seq 3438 nt   +upstreamnt  +downstreamnt
atgtttaaaaaattagtttcctttgccgcatgggcgttattcctgtgtctgctgcttatt
gtctgtgtcgtcatgtccgtgtttctggaacggtcattgctgcatgcgttcgcattgtgg
ctgatcgttattattgccgttttactggtccgctttgtctggggttctgtttcaggtatt
gcacaggcgaaatatatttccggcctgaaagcgaaatttaaacttacccggctggaatat
gtgttattcgagcactggaaaaccggtgccgcggtcattaaacgcatcagacggcgcaag
cagccgatcccctggtttgtcctgaccggcgggcggagcggtaaaacgacgctgatggct
ggtgcgggattgccgttattttccaatgagccggaaagttcgctggtggtgccgacccgt
accttacgctggtggttcttccgctctgcgggttttctcgatctctccagccagtttctg
aataaaaccccggcctttgagcgcggctggttgcggctggtgaactggtgcggacgtctg
cccgcgcccgcaggcattgtggtgtgcgtgtccgtcagcgaactgctggaaaaagatgac
gcggatctgcatctgcatgcgcggcatatccgcacgcagattgagccgctggtcagcaaa
gtcaaacgccgtctgccggtatacctgtttattacctgctgtgaccgcatgcccggcttt
agccactggacccgtcagctttcggccgcccaacgccagcagccgctggggtattactgg
cgcagttcaccgatcgtcgatggcaaggatccggcactgctggatccgctgttcaggtgt
gtgaaagacgggctggataaagtacgcgtcagcatgctttccggtggcgaaccggatgcc
aatacgctggcgctgatggatttcccggaacaactgccgcaactgcaaccggcgctgcaa
cgctatctggcggcattgtgtgagccggacgcttactttcagcctgcggcactgggcggg
atctggtttaccgccaccgagccggtcagcaaaaacagcgcgtcgcgtcaggctttcttt
atccatgaactgatgacgcggttattgccgacgttaagtcgtcagcgtgaagtcgaacct
gtcgggtttggccgccgttatctgcataaatggggcgcgatgaccttcagtgcgctggcg
attacctatctgctgatcgccggttatttcaccggccgtcttaccgcagggacaccggcg
ctgatggagaccacggcgcaggttcagcagattgagaatatcgaaggctggcgccgtcat
ccgctgcactatctgccctttgtgccggtgcttcatcaccgtcatgagcagcttgaagcc
agcattattgcgatgacaccgcgtgacaccgtcaacctgcgcgagaccgcagatcactac
cagcaacagttcaccgatgcggtgcctgaacaaaaacgcgcgctgattttggatctggcc
cgcaccctgatcaccaaacaggccatgtgggaaaaacagccggtgagtgaactgctcacc
cagcccccggttccggcggcgctgagcatgacgggcgccacggtgcctttatcccgtcag
caggatgtggtgttgcagcgcgccctgatacagcagccggggggcagaaagcagttagtg
gtgctgcgtgaattactggggcgtctggtcaacagtgatccgcagatggtatggctgttg
gcaccgtcagaggagctgacgccggtgaacctgaccgatttcctgcctttgtctgaggac
aaaacgcaggtcagctgcctgtggacgaagcagggcaccgcgcaaattcagggctggctg
gatgagatccgccgcgctggcgatgaacaggttccgatgcctgaactggcagcctttgaa
caacgctggcctgcactgcgccagacccaatggatgaccatgatgctggcgatgaaccag
caaccggcaccggtgctgagcggtgaacagtggcaaaccgcgctgattgcgctcgatcag
ggccacagccagtcgatgaaatttgcccgttacgtcagtgagcaactggacgacatccgt
gctcaggatgccgcgctctggctgcgtgaattgcgccggttaaatcagttacaggctatg
ccggtaccgggggcgctggtgccgcgcatcagtaagattcagcaatccatccagaagaaa
atgtcagcactgctgaaaattgacagcaaaacgctgacaccggtgctttcggatctgaat
gtgaagaactggaatgcgtggaaagccagcgtgcatgcggcggtttccgacgtgttcgcc
acgccgaaaagcagcgaccggctgacgcgcggcttgttccagaccggtgccgcgggcgac
agcaatccgctgcaactgctggacagccgttttaacgtgctgcgtaaaagcctgtctgcc
gagcgcgatgattttgccaccaacgcggtatggacgctgtatcagagcgatgcgcactgg
ctggtggcgcaggccatgcaacgttccgcctgctggctggagcagcaatggcagagccgg
gtgctgtggccgatggaaaataacgccagccgtctggaatacgacgatcagcaagatcag
gcgtggcaatacctgtctgactttatccgcggaccggcgaaaagtgtgctggttgtcggt
gacggtggaccccgggccggtgaattcaacggacatacgcccggcctgacgccggaattc
ctgcggatggtgaaccacgtgctgcgtccggatgacgtgctggcgatgccggaacgtgaa
aatacccgcgatgacgatgcgctggccgccctgaaagaggaacaggccgatctcgaagcc
cagatggcggcactggaagccaaaccgctggaactgacgcttaaaagcctgccagccacc
attccgggcggcgcgcggctgatgccgacaggcaccgggctgacgctgttctgcgatgag
caacagtggaaactcaacagcatgaacttcagcgaacaggcggcattccgctggcgtccg
gggcattgcagccgcgccacgctggtgatcaaattcccgggctttgacctgacttacgaa
tactttggcgacgcggcctggccggatttcctgcacgacatcgccgacggacagcaccgc
ttcaaagcggaagatttcccggatgaggctgcacaactggcggcgctgggcatcagcgaa
gtcatggtgcgttatcaggtcggttcgcagaatgcgatacaggataactggcatcaatgg
caggaacgccgtcaggcactgaatgacaacgccgtggcgcagcaggaaacgggcactaaa
aaagcggaaaaacaacggccaacggcactcaggagcgcgttctcacaattgcctgtccgt
atcaccgaatgtcactga

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