Rahnella victoriana: J9880_23270
Help
Entry
J9880_23270 CDS
T07871
Name
(GenBank) autotransporter domain-containing protein
Organism
rvc
Rahnella victoriana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
He_PIG
Big_9
Cadherin-like
Ig_SIBA-E_2nd
Cadherin_5
Glucodextran_B
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
UHM93022
LinkDB
All DBs
Position
unnamed1:complement(419661..423374)
Genome browser
AA seq
1237 aa
AA seq
DB search
MTRLRRAAGHSARFICAFILLSFVTVSPAIAQSAGCLALNNQTFSTASFTAQAYPASQFE
ATDTLTLTFTDYGTGSASNTVDTDSFGKTNYAQSVYMSYYANNGSAGTHTYTYTGSQLST
EGIRFRLTSSHGYLSPVTASCTSAASVSTDATLSALSLSAGSLSPTFSSGTTSYNASVAN
SVTSITLTPVTTDSTATVKVNGTSVISGSASGAIPLSEGSNTLTVTVTAADGTTTSGYSV
QVQRNGLAPVAGSTSASVAFNSSNNTITLPLSGGAATLVAQGSSPAHGSVVFSGSAALYT
PQQNYFGADSFTYTAGNNWGTSAPATVTVNIAAPVISLSPVTLPSATSGTPYSQTLTATG
GSGSYQFTTADALPAGLALAVNGELSGTPTATGSFNITVVAQDTTNAATGSQRYTLAVTG
QAPVAGAVSTTVAGNSSINAIVPALSGGVAASVTVTTAPLHGTATASGTSLSYTPAPGFS
GADSFTYIASNNWGSSAPATVNVNVASVTLGFSPAGGALPAATAGSPWSQTITASSGTAP
YTYSASGLPSGLSVSASTGEISGTPAASGSYAIQVSAADSNGITGTVNYQLTVAGQAPVV
SAVSSTVAANTTENLIEPVLSGGAVTSLAIVQQPAHGTARIQNLKIRYTPVAGYSGSDSF
IYSAANNFGSAQARVTLNVTTATLSVTPASGALPEGREGTAYRQTFSATGGTAPYQFRIA
GALPAGLTLSGDTLSGTPSAAGHSSFTLTATDASGVTTQVAYSLNMTRAQPVGVSHTASV
LAGKSVRVNLTENATGGPFTAARLLDSPEKTLGSATLEHSGNGVYLDFQATAQASGTVAL
RYVLLTAGSQSAPATVMLTITGRPDPSKDPDVLGLVSAQVQSAQNFARAQIRNFSDRLET
LHNPASTQSDMNGIRFNMPTSKKERSPDDTLWNAAWKNTRPLPELPQLTDKTSAQTTLNR
GNSRINYWTGGFVDFGHSGKDGVSFSHTLVGISTGADYQFTPTFTAGMGMGFGRDVSDIG
DSGSRSNGRSLSSALYGSYHPGSFFIDGLLGYSRLDYDSRRYVTEMDHFARGDRGGNQVF
GAVTSGYDYRLPALLVSPYGRLQLSRTRLDSYTESNAGGYDLAYASQTLNDVTGALGVRT
QYALPLTWSTLRWQSRVEYTQAFSDRGRARLGYADAGNDSFSADVYGDSQENLVFGLGLD
FLLPHDMTPGIAYQGTLGLDEERSRSQMIMLRMNIGF
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgactcgccttcgccgcgcagccgggcacagcgcccgttttatctgcgcttttattctg
ttgtctttcgttactgtctcaccggccatcgcacagtctgccggatgcctcgcgctgaac
aaccagaccttcagcaccgcgtcatttactgctcaggcttatcccgccagtcagtttgag
gcaacggataccctgacgctgacttttactgattacggcacgggaagcgcaagcaatacg
gttgataccgacagttttggtaagacaaattacgcgcagagcgtctatatgagctactac
gccaataacgggagcgcaggaacgcatacctatacctacacgggttctcagctttcaacg
gaggggatccgctttcgtctgacctccagccacggttacctgagtcctgtcacggcgtcc
tgtacctcagcggcaagcgtatcgacggacgccaccctctcggcactgtcactttctgcg
ggttcgctttccccgaccttttccagcgggacaacctcttacaacgcaagcgtcgctaac
agcgtgaccagcattacgctgacaccagtgaccaccgacagcacggcaaccgtaaaagtg
aacgggacctccgtcatttccggcagtgcatcaggcgctataccgttaagtgaaggcagt
aacaccctcaccgtcaccgtgacggccgccgacggcaccaccacatccggctattccgtt
caggtacaacgcaacggactggcgccagtcgccggctcaaccagcgccagcgtggcgttt
aacagcagcaataatacgattaccctgccgctttccggcggcgcagccacattagtggcg
cagggatcgtcacctgctcacggttcagtggtgttctcaggatcagccgccctttataca
ccgcagcaaaattatttcggcgcggacagtttcacttataccgcgggcaacaactggggc
acatccgcccctgcgaccgtcaccgtgaatatcgccgcaccggtgatctccctttcgccg
gtcactttgccttctgccacatccggcaccccctacagccagacactgaccgcaacgggc
gggtcgggcagctatcagtttactactgcggatgcgttacctgccggattagcactggca
gtgaatggcgaactttcgggcacgccgaccgcaacgggcagttttaacattactgttgtg
gcacaggatacgacgaacgcggcaacgggcagtcagcgctacacccttgccgttaccggg
caggcaccggtcgcgggcgcagtcagcaccaccgtagccgggaacagcagcattaacgcc
atcgttccggccctttcaggcggcgtcgcagcgtcagtcaccgtcaccaccgcaccgctt
catggtacggcgacagcttcaggaacctcactgagttacacgcctgcgcccggattttca
ggtgccgacagtttcacgtacatcgccagcaataactgggggtcttcagcgcctgccact
gtgaatgtgaacgttgccagtgtcacgcttggcttctcaccggcaggcggtgcattgccc
gccgccaccgcaggttcgccgtggtcacagaccataacggccagcagcggcaccgcccct
tacacctacagcgcatccggattgccttcggggctgtccgtcagtgccagcaccggcgag
atttcaggtacgcccgcggcctccggcagttatgccattcaggtcagcgcagcggacagc
aacgggatcaccggcacggtgaattatcagctgaccgttgccggacaggcaccggtggtc
agcgcggtatcctcgaccgtggcggccaataccacagagaacctgattgagccggtgtta
tccggtggcgcggtcacctcgctggcgattgtgcaacaacccgcgcatggcaccgcgcgg
atccagaacctgaaaatccgctataccccggtagcgggctattccggcagcgacagtttc
atttacagcgccgccaataatttcggcagcgcgcaggccagggtcacgctgaatgtcacc
acggccacgctgtccgtcacacccgccagcggcgcattgcccgaagggcgcgaaggtacg
gcttaccgccagacgttcagtgcaacaggcggcaccgcgccttatcagttccgcattgcc
ggggcgttgcccgccggattaacgctcagtggcgataccctgagcggcacgccctccgcc
gcaggtcacagcagtttcacgctgaccgccaccgacgccagcggcgtgactacgcaggtc
gcgtattcactcaacatgacccgcgcgcaacctgtcggcgtcagccatacggcatccgta
ctggcggggaaatcagtgcgggtaaacctgactgaaaacgctaccggtggaccgtttacc
gcagcccgtctgctcgattcgccggaaaaaacactgggcagtgcgacactggaacacagc
ggcaacggtgtgtatctggattttcaggcaacggctcaggcttccgggacggtggccctg
cgctatgtattgctgaccgccggttcacaatcagcccctgcgacagtgatgctgaccatc
accgggcgccctgacccgtccaaagaccctgacgtgctcgggctggtcagtgcgcaggtt
cagtcagcacaaaatttcgcgcgggcgcagatccgcaatttcagcgaccgtcttgagacc
ctgcataatccggccagcacacagagcgatatgaacggcatccgcttcaacatgccgacc
tctaaaaaggagcgcagccctgatgatacgctgtggaatgccgcgtggaagaacacccgc
ccgttgccggaactgccgcaactgaccgataaaacctccgcgcagaccacgcttaaccgc
ggcaactcccgcatcaattactggactggcggctttgtcgattttggtcattccggtaaa
gacggcgtaagtttcagccatacgctggtggggatcagcaccggcgcggattaccagttc
acgccgacatttaccgccggcatgggaatgggctttggcagggacgtcagcgatatcggc
gacagcggctcgcgcagcaacggacgttccctcagttcggcgctttacggcagttatcat
ccgggcagtttctttatcgacggcctgctcggctacagccgtctggactatgacagccgc
cgttacgtcactgaaatggaccacttcgcccgcggcgatcgtggcggtaatcaggtgttt
ggcgcggtgacgtccggttatgactatcgcctgcccgccctgctggtctcgccttacgga
cgcctgcaactgtcgcgcacccggctggacagctacaccgaatccaacgccgggggctac
gatctggcgtatgcctcacagacgctgaatgacgtgaccggtgcgctgggcgttcgtact
caatatgccctgcccctgacgtggtcaacgctgcgctggcaaagccgggtcgaatacact
caggctttcagcgatcgcggccgcgcccgtctgggctatgcggatgcgggtaatgacagc
tttagcgccgatgtttacggcgacagtcaggaaaatctggtgttcggcctggggctggat
ttccttctgccccatgacatgactccgggcatcgcctatcagggcacactcggactggat
gaggaacgcagccgctcgcagatgatcatgctgcggatgaatatcggcttctga
DBGET
integrated database retrieval system
