KEGG   Rahnella victoriana: J9880_23380
Entry
J9880_23380       CDS       T07871                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
rvc  Rahnella victoriana
Pathway
rvc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    J9880_23380 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rvc02044]
    J9880_23380 (tssH)
Secretion system [BR:rvc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   J9880_23380 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_16 AAA_5 ClpB_D2-small NBD_SMAX1 AAA_22 AAA_7 NACHT Clp_N TniB AAA_14 AAA_29 bpMoxR nSTAND3 Sigma54_activat RsgA_GTPase AAA_24 nSTAND6 SLFN-g3_helicase AAA_6 ENOX1
Other DBs
NCBI-ProteinID: UHM93043
LinkDB
Position
unnamed1:446932..449529
AA seq 865 aa
MIYVDLPTLVKRLNPIARHALEAAAAHCVSQGDAEITVSQVLCQMISTPLSDVRIILNRA
GVESEQLRESLAHPVTNYQSLNPTYPSFSPLLVEWLQDSWLLASTEMEHNQLRSGVMLMT
LLLSTSRYLHPAASQLLLPVNRELLRQNFADWTADSSETPVVEKNTGHTFPTHSESLLAR
YASNMTEQARNGALDPVLCRDEEIDLMIDILCRRRKNNPIVVGEAGVGKSALIEGLALRI
IDNQVPEKLRNCDLMTLDLGALQAGAAVKGEFEKRFKGIMTEIAQSATPVILFIDEAHTL
IGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPSA
EEATVIMRGLRTVYEQAHGVLIDDEALQAAAIMSDRYISGRQLPDKAIDVLDTAAARVAI
NLTSAPRRVSALKTQLHQQAMEIEMLEREQRLSLSDPDKRLLALKNKREEIQSQLTDLTS
GWEKQQHLVRQIIDLRTALLAKEDDSSCEDSEALKVLGIELEELQSHQSLVSPHVDKKQI
AAVIAEWTGVPLNRLSQSELSVVTELPVYLSKEIKGQEAAIYCLHQHLLTARADLRRPGR
PMGAFLLVGPSGVGKTETVLQIAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGY
GEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQVFDKGEMADGEGRVIDCKNVVFFL
TSNLGYQTIVDNTAQPGLLNELLYPELAGFFKPALLARMEVVPYLPLDKDTLSTIIHSKL
TRLDNLLRQRFNADVVIEPEVVDEILLRATRAENGARMLESIIDGALLPPVSLLLLQKMA
TGRAISKIRIAAEENVFSAQVEEAV
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgatttacgttgacttgcccactttggtaaaacgccttaaccctattgcccgtcatgct
ctggaagctgcggccgcacattgtgtcagtcagggtgatgctgagattaccgtttcccag
gtgttatgccagatgatctcgacgccactcagcgatgtccggattatcctgaatcgtgcg
ggtgttgagagcgagcagttgcgggaatcgctcgctcaccctgttacgaattatcaatca
ctgaatccgacgtaccctagtttttccccccttctggttgaatggctacaggacagttgg
ttactggcatcaacagagatggagcataaccagctgcgcagcggagtgatgttaatgacg
ctattgctcagcacgtcgcgttatttgcacccggccgccagccaattgttgttgccagtg
aaccgtgaattacttcgccaaaattttgccgactggacggccgattcatctgaaacgccg
gtggtggagaaaaacacagggcacactttcccgacccattcagaaagcttactcgcccgt
tatgcctccaatatgaccgaacaggcacgtaacggcgcactcgatcctgtgctatgtcgc
gatgaagagattgacctgatgatcgatattctctgccgccgccgtaaaaataatcccatt
gtcgtgggagaggctggtgtggggaaaagtgcgctgatagaaggtttggccttacgcatc
attgataatcaggtaccagaaaaattgcgtaactgcgatctgatgacgcttgatctcgga
gcacttcaggccggggccgcagtgaaaggggaatttgaaaaacgtttcaaaggcattatg
actgaaattgcccagtcagcgacgccagtgattctgttcattgatgaagcccacacgttg
attggtgccggcaaccagcaggggggattggatatttccaatctgcttaaacctgcgttg
gctcgtggcgagctcaaaacaatagcggctaccacatggagcgaatacaagaaatacttt
gaaaaagacgcggcgttgtcgcgccgtttccaactggtcaaagtctctgaaccgagtgca
gaggaagccactgtgattatgcgtggtctgcgtactgtctatgagcaagcacatggtgtt
ctcatagatgatgaggcattacaggctgcagcgatcatgagcgatcgctatatttcaggc
cgacaattgccggacaaagccatcgatgtgctggacacggctgctgcgcgggtggctatt
aacttaacatcggccccgcggcgggtatctgcgctgaaaacgcagttacatcagcaagcg
atggaaattgagatgcttgaacgtgaacagcgtctcagcctgagcgatccggataagcgt
ctgctcgcgctaaaaaataaacgtgaagaaattcaatcacaactgacagatttaacgagc
gggtgggaaaaacaacagcatcttgtacgccaaataatcgatctgcgtacggcgttgctg
gcaaaagaagatgacagttcctgtgaagattcagaagcacttaaggttctgggtatcgaa
ctggaagaacttcaaagccatcagtctttagtttctccgcatgtagataagaaacagatc
gccgcagttatcgctgaatggacgggagtgccattaaaccgcctttcacaaagtgagctg
tctgtcgtgacagaattacccgtttacctgagtaaagagatcaaaggtcaggaagccgca
atttattgcctgcatcaacatttactgactgcgcgtgctgatttacgtcgcccgggccgg
ccgatgggggcgtttttgcttgtcgggccaagcggggtcggcaaaacagaaactgttctt
cagattgccgaactcctttatggcggacgccagtatctgacgacaatcaacatgtcagaa
tttcaggagaagcatacggtttcccgcctgattggctcacctcccggctatgtaggttat
ggcgaaggtggtgtgctaacggaagccattcgtcagaagccttattctgttgtgttattg
gacgaagttgaaaaggcacaccctgatgttctgaatttgttctatcaggtgtttgacaaa
ggggaaatggcagatggtgaaggtcgcgtaattgactgtaaaaatgtcgttttcttcctg
acctcgaaccttggctatcagacgatcgtcgataatacggctcaaccggggttgctcaat
gagttgctgtatcctgaactcgccggattctttaagcctgcccttttagcccgaatggaa
gtcgtgccttacctgcctctggataaagataccctcagcacaattattcatagcaaatta
acgcgtctcgataatttactacgtcagcgttttaatgcggatgttgtcattgaacctgag
gtcgtggatgaaatcctgctccgggctacccgcgctgaaaatggtgcccgtatgcttgag
tccatcatcgatggtgcccttttaccgcctgtctcattgctgctgctgcaaaaaatggca
acgggccgggcgatcagcaaaatcagaattgcagcagaggagaatgtatttagtgcgcaa
gttgaggaggctgtatga

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