KEGG   Rahnella victoriana: J9880_23400
Entry
J9880_23400       CDS       T07871                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
rvc  Rahnella victoriana
Pathway
rvc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rvc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    J9880_23400 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rvc02044]
    J9880_23400 (tssM)
Secretion system [BR:rvc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   J9880_23400 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical DUF6541 GTP_EFTU
Other DBs
NCBI-ProteinID: UHM93047
LinkDB
Position
unnamed1:452414..455944
AA seq 1176 aa
MKLPSFIRIVKPAIPRFKASVPVVLVLMACIALIWLWVYGPQWKLKDSHPFEPLLSRWLV
TAILVLMGVCWLAIKVFNRLQHLEKLQLQVRKQSDDPVFADIEQQNLYLNRWKQRLQNHF
GVSNYVYRLPWYMVIGAQKSGKTTLIKEGYKLMEIAGLESSHIEDAEALRVHCWLGEQAV
IIDPAGELIEQPPVSVAGKSSLNPRLWESLLSWLVEQRKRQPVNGLILVVDLHQLLTANK
SQRENYISTMQQRMQDVRLSLNCQLPLYVVLTKMDLLYGFEAMYQTLDKVAREAVLGVTF
TLTSEPDAWRQELQKFWQQWMIQLNGAMPEMMLNSVDAGQRSRLFSFTRQIQGLQEYIGQ
MLEGILHSGDQIQPTLRGVYLTSAQQRGQMDDVFTQSAAVQYHLSPQAFPTWPVTDTMPY
FTKELFGGVLLAEPNLAGENSIWLRSTRKRMIICSFAGAAIAATLWGYWHYYHKVNYRAG
EEVLAQAKKFLSIPAPEGNDIYGNLELPLLNPIRDATLAYGDYHEKKTFYADMGLYQGDD
IGPYVESTYLQLLQRRFIPSLMSGLLQQMNAAPKESEQKLEILRVMRMLDDGSGRNIPLV
EQYMAKIWSRQFNGQRELQQQLMNHLDYALRHTDWHAAREKNDQYAIRSFAPYLKPISSA
QQELSKLSIYQRVYQNLLVKARDTLPSSLNLRDQIGTSFDDVFVSANDNLLEIPQVLTRN
GLQNYFVKQNDQLIDLTVMDSWVLNLSKNVEYSEADRKEIQRQVTEQYFGDYNATWHAAL
SNLSVTEFEDMSQAIKAIEQVISGDQPFRRALQTLNDNTRLPAIQDAIVGKERQNLLQKP
DYLLLARINREFAPETSVLVEHGDKGSELQSVYQKLTELHRYLLVIHNSPSPGKAALKAV
QMRLEKNSSDPIFEVQQQAKNLPEPLNRWVGALAEQAWRVVMMEAIKSLEVEWGETVVKQ
YQTYLEGRYPFDPQSKEDVPLSEFERFFGPKGTLDTFYQENLKPFIENSLTSGSDGQLLI
RPDVLEQLEQAQKIRDTFFSAQTGLGTQFAVEPVQLSGNKRRSVLNLDGQLLDYSHGRNN
TVHLVWPNSMRSGIESSVTLVPDQTGKSPRTLSFSGPWGQLRLINSGELTNVGAGSFDVR
FKVDGGEMTYRISVDESDNPFAGGLFSEFSLPETLY
NT seq 3531 nt   +upstreamnt  +downstreamnt
atgaaattgccgtcctttattcgaatcgtaaaacctgcgattcctcgttttaaagcgtca
gtacccgtcgttttggtgctgatggcttgtattgcgcttatctggctctgggtttatgga
cctcagtggaagctgaaagatagccacccgtttgaacccttattgagccgctggctggta
acggcaattctggttctcatgggtgtttgctggctggctataaaggtgttcaatcgcctg
caacacttagaaaagcttcagttgcaggtcagaaagcaaagtgatgaccctgttttcgcc
gatattgagcaacagaatctttatctgaacagatggaaacagcgtttgcagaaccacttc
ggggtatcaaattatgtgtatcgtctgccctggtacatggtgattggagcgcaaaagagt
ggaaaaacgacccttataaaagagggatacaaattgatggagatagcagggcttgagagc
agtcatatagaagatgcggaggcattacgcgttcactgctggctgggagagcaggccgtc
attatcgatccggcgggtgaactcattgaacagcctcctgtgtctgtcgcgggcaagtca
tctctcaatccccggttatgggaaagcttattgtcctggctggtcgagcagcgtaagcgc
cagcccgtcaacgggctgatactcgttgtcgatcttcatcagttactgacagcaaataaa
tcgcaacgtgaaaactatatttcaactatgcagcaacgtatgcaggacgtacgtctgagt
ttgaattgccaactgcctctctatgtcgtgttaacgaaaatggacctgctctacgggttt
gaagcaatgtatcagacgttggataaagtggcccgcgaggcggttctcggtgtcactttc
acattgacctctgaacccgatgcatggcggcaggaattacaaaaattctggcagcaatgg
atgattcaacttaatggtgccatgcctgaaatgatgctgaatagcgtcgatgcaggacag
cgaagccggttatttagttttacccgccaaattcaggggctgcaggaatatatcgggcag
atgctggaaggaattctgcatagcggagatcaaatacagcccacactccgcggcgtatac
cttacttcagcgcaacaacgcggtcagatggatgatgttttcacccagtcagccgctgtg
caatatcatctgtcccctcaggcatttccaacctggcctgtcactgacaccatgccttat
tttacaaaagaactttttggtggggtgctgctcgcagagcctaatctggctggtgaaaac
agcatttggctgagaagtaccagaaagcggatgattatttgctccttcgccggtgctgcc
attgcagcaacgttgtggggctattggcattattatcataaggttaattatcgtgccgga
gaggaagtcctggcgcaggcaaaaaaattcctttcaattccggcaccggaagggaatgac
atttacggtaatcttgagttgccacttctcaacccgatccgtgatgccactctggcttat
ggagattatcacgagaagaagactttctacgctgatatggggttatatcagggggatgat
attggtccctacgtcgaaagtacctatctgcaactgctgcagcgacgatttattccctct
ttaatgagcggcttacttcaacagatgaatgccgcaccgaaggaaagtgaacagaaactc
gaaatcttacgggtaatgcgcatgctggacgatggcagtggccgcaatattcctttggtt
gagcagtatatggcgaaaatctggagccggcagtttaatggtcagcgcgaactacaacag
caactgatgaaccatcttgattatgccctcaggcatactgactggcatgctgcgcgggaa
aagaacgaccagtatgcaatcagaagtttcgccccttatctgaagccgatcagttctgca
caacaagagctgagcaaactctccatttatcagcgtgtttatcaaaatttgctggtcaag
gccagagacacattgccttcttcacttaaccttcgcgaccaaatcggaaccagtttcgac
gatgtatttgtttccgcgaatgataatttactggagatcccgcaggtcctcacacgtaac
ggattacaaaattattttgttaaacaaaatgatcagctaatcgatctgactgtcatggat
agctgggtgcttaatctcagtaagaatgtggaatacagtgaagctgaccgcaaagagatc
cagcgacaggtcaccgaacagtattttggtgattacaatgccacgtggcatgcggcgtta
agcaatttgtctgttactgaatttgaggatatgtcgcaggcaatcaaggccatagagcag
gtcatcagtggtgatcagcctttccgccgggcgttacaaaccctgaacgataacacccgc
ttacctgccattcaggatgcgattgtcggtaaggaacgtcagaatttgctgcaaaaacct
gactacctgttattggcgcgtatcaatcgtgaattcgcaccagagacatcggtgttggtc
gaacatggtgataaaggcagcgagctgcagagtgtttatcaaaagctcactgaactgcat
cgctacctgctggtgatccacaactcaccctcgccgggtaaagcggcgctgaaagcagtg
cagatgcgactggagaaaaatagcagtgaccctatttttgaagttcagcagcaggccaaa
aatttgcccgaacctctgaatcgttgggtgggggctttggcagaacaggcatggcgtgtt
gtgatgatggaagcgataaagtcacttgaagtcgaatggggagagacagtggttaagcag
tatcaaacctatctggaaggacgttatccttttgatccgcaatcaaaagaagatgttcca
ttaagtgaatttgaacgcttctttggccctaaaggaacccttgatactttctatcaggaa
aaccttaaaccctttattgagaacagtttaacaagtggcagcgacggacagttattgata
cgccctgatgttttagaacaacttgaacaggcgcagaaaatccgcgataccttcttctcc
gcacaaacagggctgggcacgcaatttgccgttgagcctgtgcaactgagtggcaacaaa
cgccgcagtgtactgaatctggatggccagttgctcgattactcgcatgggcgcaacaac
acggtacatctcgtgtggccaaactctatgagatctgggatagaaagttcagtcacgctg
gtacctgaccagaccggaaaatcaccgcgtacccttagtttcagtggcccgtggggacaa
cttcgcctgatcaactcaggggagctgactaacgtaggcgccggttctttcgatgttcgt
ttcaaagttgatggtggcgaaatgacttatcgtatttccgttgatgaatctgataatcca
tttgcaggtggtttattcagcgaatttagcctgcctgaaacgttatattga

DBGET integrated database retrieval system