Candidatus Rickettsiella viridis: RVIR1_00300
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Entry
RVIR1_00300 CDS
T05765
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00541
Biosynthesis of various nucleotide sugars
rvi01100
Metabolic pathways
rvi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RVIR1_00300 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rvi01005
]
RVIR1_00300 (hldD)
Enzymes [BR:
rvi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RVIR1_00300 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
rvi01005
]
Core region
RVIR1_00300 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BBB14572
UniProt:
A0A2Z5V285
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All DBs
Position
30729..31682
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AA seq
317 aa
AA seq
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MIIVTGGAGFIGSNLVKQLNVNYPGMPIVIVDDLTQGIKFKNINDCMVADYLDQQNFLEK
IKQNKYFPKLKAIFHQGACSTTTEWNGKYMMENNFEYSKVLLHYCLSWKIPFIYASSASV
YGMGHIFKEELQYEKPINVYAYSKYLFDQYVRNILPEAKSQIAGLRYFNVYGPRENHKGN
MASVVLHADQQLRETGIINLFQGNEGYDDGEQQRDFIYVDDAVDINLWFLKSKKSGIYNA
GTGHSESFNALAQAVIDFHGRGEIRYIPFPVSLQGCYQSFTQADLSKLKAIGYAGSFKSL
AEGVKAYLSTIHKSITI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtgacggggggcgctggttttattggtagtaatttggttaagcagttaaat
gttaattatccgggaatgcctattgttattgtggatgatcttacgcagggtattaagttt
aaaaacatcaatgattgcatggttgcagattatctagatcagcaaaattttctagaaaaa
ataaaacagaataaatattttcctaagttaaaggctatttttcatcaaggtgcttgttct
accaccactgaatggaatgggaagtacatgatggaaaataactttgaatattcaaaagta
ttattacattattgtttatcttggaagattccctttatttatgcttcaagtgcctctgtt
tatggcatgggtcatatttttaaagaagaattgcaatatgaaaaaccaattaacgtttat
gcctattctaaatatttatttgatcagtacgtgcgaaatattttgccagaggcaaaaagc
caaatagcaggcttacgttattttaatgtgtatgggccgcgtgaaaaccataaaggaaat
atggccagcgtcgtgttacatgcagatcagcagctaagagaaacgggtattattaattta
tttcaaggaaatgagggttatgacgatggcgaacaacaacgtgattttatctatgtcgac
gatgcggtggacattaatttatggtttttaaagtctaaaaaaagcgggatttataatgca
ggaacaggacatagtgaaagctttaatgcgctggcccaggcagtaattgattttcatggg
cggggggagattcgctatattccttttccagtatccttgcagggatgttaccaaagtttt
acgcaagctgatctttctaaattaaaagcgatagggtatgccggatcttttaaatcgctt
gctgagggcgtaaaagcgtatctttcaactattcataaaagtattaccatttaa
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