Candidatus Rickettsiella viridis: RVIR1_02060
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Entry
RVIR1_02060 CDS
T05765
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
rvi
Candidatus Rickettsiella viridis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvi02000
]
RVIR1_02060 (bamB)
Transporters [BR:
rvi02000
]
Other transporters
Pores ion channels [TC:
1
]
RVIR1_02060 (bamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
Beta-prop_EMC1_N
PQQ
Beta-prop_FAM234A_B
Beta-prop_WDR36-Utp21_1st
Beta-prop_NUP159_NUP214
Big_12
Motif
Other DBs
NCBI-ProteinID:
BBB14743
UniProt:
A0A2Z5UUW7
LinkDB
All DBs
Position
208017..209174
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AA seq
385 aa
AA seq
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MPKFRHLVVFLLFFLLAACAGLGDDNTPPPAALTSYPFQFQPVPLWSRVTGGGMDKDFLR
LGPVIQDSQVFVSNKSGLVTAVTLSNGHKLWQANLKHPTSSSPAVGEGIVVLASMQPQLI
ALAAESGDLMWRAALPNQVLAPPIINQGHVIVKTVDGKVLAFALKTGQRLWAYNHGAPTL
VLRASSMPRIIGNKVLIGFSDGTLTALNLNDGRLLWEHTIAYPQGVTQADQLVDIAADPR
LDSKMIYVATYQGKLSAVSLQTGQIQWQRSFSTYSGLTLGKNLYVTDSEGGLWAFDPSTG
HLLWHNRLLQNRGLTAPVIMGNNLVVGDKEGYLHWFAQADGRPLARVLVHDSASIVAAPR
VAYPLICVLTQQGGLSVWTESALHI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagtttcgtcatttagttgtatttcttttattttttctattggctgcttgtgcg
ggtttaggtgatgacaatacgcctcctccggcggcattgacttcttatcctttccaattc
cagcctgtacccttgtggtcaagggtaacgggtggtggaatggataaagattttttacgg
ttaggacccgtcattcaggatagtcaagtttttgtcagtaataaatcggggcttgtgacg
gcagttacattgagtaacggccataaattatggcaagcgaatttaaaacaccccaccagc
agtagtccagctgttggtgaaggcatagtcgttcttgctagcatgcaaccacaattaatt
gctttagcggcagaaagtggtgatttaatgtggcgagcggcattacctaatcaggtttta
gcgccacccatcattaatcagggccatgtaatagttaaaacagtggatggaaaagtatta
gcgtttgctttaaaaactgggcagcggttatgggcttataatcatggtgcgcccacgtta
gtgctgcgcgcaagcagtatgccaaggattataggtaataaggtattaatcggtttttct
gatggaacactcaccgcattaaatttaaatgatggaaggcttttatgggaacatacgatt
gcctatcctcaaggcgtaactcaagcggatcaactggttgatattgcagccgatcctcga
ttagacagcaaaatgatttatgtggccacttaccaaggtaaattaagtgcagtttcctta
caaacaggccaaatacagtggcaacgatctttctcaacttattcagggcttactttagga
aaaaacttgtatgttacggatagtgaaggtggattgtgggcgtttgatccttcaacagga
catctgctttggcacaaccgtttgttacagaatagaggtttaacagcccccgtcatcatg
gggaataatctggtggtaggcgataaagaaggttatcttcactggtttgcacaagcggat
ggtcgccctttagcacgcgttttagttcatgacagcgcaagcattgtagcagcacctcgt
gtggcttacccgctcatttgtgttttaactcagcagggtggattgtctgtttggacagaa
tccgcattacatatatga
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