Candidatus Rickettsiella viridis: RVIR1_04110
Help
Entry
RVIR1_04110 CDS
T05765
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00260
Glycine, serine and threonine metabolism
rvi00630
Glyoxylate and dicarboxylate metabolism
rvi00670
One carbon pool by folate
rvi00680
Methane metabolism
rvi01100
Metabolic pathways
rvi01110
Biosynthesis of secondary metabolites
rvi01120
Microbial metabolism in diverse environments
rvi01200
Carbon metabolism
rvi01230
Biosynthesis of amino acids
rvi01240
Biosynthesis of cofactors
rvi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RVIR1_04110 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RVIR1_04110 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RVIR1_04110 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RVIR1_04110 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RVIR1_04110 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RVIR1_04110 (glyA)
Enzymes [BR:
rvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RVIR1_04110 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Gmad2
Motif
Other DBs
NCBI-ProteinID:
BBB14925
UniProt:
A0A2Z5UV37
LinkDB
All DBs
Position
436700..438037
Genome browser
AA seq
445 aa
AA seq
DB search
MVYSTQETIADFDKDLWQAMQHEAGRQEDHLELIASENYTSPCVLQAQGSVLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKKLFKADYANVQPHSGSQANAAAFMALLEPGDRLLGM
SLADGGHLTHGSTVSFSGKIYQATAYGVDSKTQLIDYDEVEKLAKEHKPKLIIAGFSAYS
RVVDWQRFRDIADEVGAYFMVDMAHVAGLIAAGLYPSPVPIADVVTSTTHKTLRGPRGGL
ILAKANPEIEKKLNSAVFPGLQGGPLMHVIAGKAVAFEEALQADFKDYQKQVMLNAKAMA
ETMAEKGYKIVSGGTDNHLFLVDLTDKNITGKAAENVLEAAYMTINKNAVPNDPRSPFVT
SGIRLGTPALTTRGMKEQEMQQVAAWVCMVLDRLKDSAELESDAQNQLIGSLKESVEIKK
IKQEVIALCRRFPVYSRMESANFVA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtttattcaacgcaagaaacgattgctgattttgataaggatctttggcaagcgatg
cagcatgaggcggggcgtcaagaagatcatctagaattaattgcttctgaaaattatacc
agcccctgtgtattacaagcgcaaggttctgtcttaacgaataaatatgccgagggttat
ccaggtaaacgttactatggtggctgtgagtatgtcgatgtggttgagcaattagcgatt
gatcgcgtgaaaaaattgtttaaagccgattatgccaatgtacaaccgcattcaggttcg
caggccaatgcagcggcttttatggccttattggagccgggggatcgcctattaggtatg
agtttagcggatggtggtcatttgacgcatggttcgacggttagtttttcaggaaaaatc
tatcaagcgacagcatatggggttgattcaaaaacacagctcattgactatgatgaagtc
gaaaaactcgccaaggagcacaaacctaaattaattattgcaggtttttcggcgtattcg
cgagtggtcgattggcaacgattccgtgatatagcggatgaggttggcgcctatttcatg
gttgatatggcgcatgtggcggggttgattgcggcgggcctttatccttcacctgtccca
atagctgatgtcgtgacttctactacgcataaaacgttacgaggtccgcgtggcggcttg
attttagctaaagccaatccagaaatagaaaaaaagctgaattccgctgtgtttcctggc
cttcaaggaggcccgttaatgcatgtgattgctggaaaagcggtggctttcgaagaagcc
ttacaagctgattttaaggactatcaaaaacaagtcatgctcaacgctaaagcaatggct
gaaacaatggctgagaaaggctataaaattgtttcaggcggaacagataatcatcttttt
ctagtggatttaacggataaaaatatcacgggtaaagcggcagaaaatgtattggaagcg
gcttatatgaccataaataagaacgctgtgccgaatgatccacgttctccttttgtaacc
agtggtatacggcttggaacacccgccttaacaactcggggcatgaaagaacaggaaatg
cagcaggtagcggcttgggtttgtatggttttagaccgtttaaaggactctgctgagctt
gaaagtgatgcgcaaaatcaattgatagggtcattgaaagagtcggttgagattaagaaa
atcaaacaagaagtaatagcactatgtcgtcggtttccagtatactcgcgcatggaatca
gctaattttgttgcataa
DBGET
integrated database retrieval system