Candidatus Rickettsiella viridis: RVIR1_04990
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Entry
RVIR1_04990 CDS
T05765
Symbol
fadD
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00061
Fatty acid biosynthesis
rvi00071
Fatty acid degradation
rvi01100
Metabolic pathways
rvi01212
Fatty acid metabolism
rvi02024
Quorum sensing
rvi04146
Peroxisome
Module
rvi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RVIR1_04990 (fadD)
00071 Fatty acid degradation
RVIR1_04990 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RVIR1_04990 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RVIR1_04990 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rvi01004
]
RVIR1_04990 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvi04147
]
RVIR1_04990 (fadD)
Enzymes [BR:
rvi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RVIR1_04990 (fadD)
Lipid biosynthesis proteins [BR:
rvi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RVIR1_04990 (fadD)
Exosome [BR:
rvi04147
]
Exosomal proteins
Exosomal proteins of breast milk
RVIR1_04990 (fadD)
Exosomal proteins of breast cancer cells
RVIR1_04990 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BBB15004
UniProt:
A0A2Z5UU61
LinkDB
All DBs
Position
518211..519872
Genome browser
AA seq
553 aa
AA seq
DB search
MEKIWLNRYQQQVPSEIDPDIYPSLNALFTDSCQKFKNLPALNFFNTSISYQKWAMLSEQ
LAAYLQKQLNLKKGGRVALMLPNCPQYMVCVFAVLQAGLTVVNVNPLYTPSELIQQIKHS
QAETIVILENFLPKLSQGLKETHVKHVISSELGDLLPWWRSWVISWFVRRTIKNSPKAKS
HFPTIKFSRCLKEANNLHYQPPSLQNQDIAFLQYTGGTTGTPKAAMLTHRNMLANIEQLT
AWVRPILKEGSETMITALPLYHIFSLMVNGLMGLRLGATNVLIPDARNIRQLISVLGKQH
FSVLLGVNTLFRALLKKPAFSQLDFSSLKIALGGGAPLQDVVKKRWKEVTGKLLLEGYGL
TEASPVVCAPPWDLVTAGNHVGLPLPSTDIRLCDTQEREVPLGEVGELCVKGPQVMKAYW
TAGVEETIPIFDSEGWLLTGDLARLDQQGFVFIVGRKKELILVSGFNVYPGEIEEVIQKN
SKVSEAAVLGIPSESTGEAVKAFVVRRDNTLTVEELLSYCRQYLSAYKVPTQISFLDYLP
KSSLGKILKKQLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatttggttaaatcgttatcagcaacaagtaccttctgaaattgatcctgat
atttatccttcacttaatgccttatttaccgattcatgtcaaaaatttaaaaacttaccg
gcattgaatttttttaatacgtctattagctatcaaaaatgggccatgttaagcgagcag
ttggcagcgtatttacaaaaacaattaaatttaaaaaaaggtgggagggtggcgttgatg
ctgcctaattgcccgcagtatatggtttgtgtttttgcggtgctacaagctgggttgacg
gttgttaatgtcaatccactgtataccccttcagaattgattcaacaaattaaacattca
caagcagaaactattgttattctcgaaaattttttacccaaactatcgcaaggcttaaaa
gagacgcatgtcaaacatgtgattagtagtgagttaggcgatctattgccttggtggcgt
tcatgggttattagttggtttgtgcgacgaaccataaaaaatagtccaaaagcaaagagt
cattttccaacgattaaattttcgcgatgtttaaaagaagctaataacttgcattaccag
ccaccttcactgcaaaaccaggatattgcgtttttacaatatacaggcggcacaacaggt
acaccaaaagccgctatgttaacgcatcgtaatatgctcgcgaatattgaacaattaacc
gcatgggtaaggcctattttaaaagaaggttcagaaacaatgattacagcattaccgctg
tatcatattttttcattaatggtgaatggtttaatgggtttacgtttaggcgcgacgaat
gtactcattcctgatgcaagaaatatccgacaattaataagtgtattaggaaagcagcat
tttagtgtattgctgggggtgaataccttatttagggcacttttaaagaaacctgctttt
tcacaattagattttagttccttaaaaattgcattaggtggtggtgcgccactacaggat
gttgtaaaaaaacgttggaaagaagtcactgggaaattattactggaaggttatggtttg
acagaagcatcacctgtggtttgtgcaccgccctgggatttggttacggcaggtaatcat
gtgggtttgcctttaccttctacggatattcgtttgtgcgatacacaagaacgggaagta
cctttaggagaagtaggggaattatgtgttaaaggtcctcaagtaatgaaggcatattgg
acagccggtgtagaagagactattcctatttttgatagtgaagggtggttgttaactggc
gatttagccaggctagatcaacaaggcttcgtttttatcgtgggtcgtaagaaagagtta
attctggtttcgggttttaacgtttatccgggagaaatagaagaggttattcaaaaaaat
tctaaggtcagtgaagcagctgttctgggtattccttctgaaagcacaggcgaggccgtt
aaagcattcgtagtacgcagggataatacgttaacggtagaagagttattaagttattgt
cgtcaataccttagcgcttataaggtgcctacacaaatttcttttcttgattatcttcca
aaatcatcattgggtaagatattaaaaaaacaattaaaataa
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