Candidatus Rickettsiella viridis: RVIR1_05350
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Entry
RVIR1_05350 CDS
T05765
Symbol
rfbD
Name
(GenBank) lipopolysaccharide transport system permease protein
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RVIR1_05350 (rfbD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvi02000
]
RVIR1_05350 (rfbD)
Transporters [BR:
rvi02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
RVIR1_05350 (rfbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
Motif
Other DBs
NCBI-ProteinID:
BBB15040
UniProt:
A0A2Z5UVQ2
LinkDB
All DBs
Position
557837..558709
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AA seq
290 aa
AA seq
DB search
MDGINEEVFLENTLLQNNDNVAPVIPFNSKYRLALADICDGLKQWRIWLLLAWQEVKLRY
RRSTLGPFWITLSMAITIYTMGLLYGHLFKMDLSQYYPFLACGILGWGLISSLLTESTNI
FVESEQFIKQIKQPYSLFIFKNVTRSFIIFLHHIIILVPIFIFFNVKINVYSLFFLFSLT
VIWLNAVTYGVMLAILGTRFRDIVQLVNSLIQVIFFLTPIIWLPSVLPDRYQYIIQLNPF
AQFMELLRNPLLGSLPSHYTLFFTLFITLLGLSAAFMLFARCRARIAYWL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatggtataaacgaagaggtatttctagaaaacacgctgttgcaaaataatgacaac
gttgctccggtaataccgtttaattcaaaatatcgtctcgcgctagctgatatttgtgat
ggattaaagcagtggcgtatttggttgttacttgcctggcaagaggttaagcttcgctat
cgtcgttcaactttaggtcctttttggatcacgctcagtatggccattacgatctatacc
atgggattgttatatgggcacttgtttaaaatggatttatctcaatattacccttttttg
gcctgcggtattttaggctggggtcttatttcatctttactgacagaaagtaccaatata
tttgttgagtcagagcagtttattaagcaaataaagcaaccttattccctgtttattttt
aaaaatgtaacgcgatcattcattatttttttgcatcacatcattatccttgttcctatc
ttcattttctttaatgttaaaattaatgtttattccctattttttttattcagcttaacc
gtcatttggctcaatgcagtgacttatggtgtgatgttagctatcttaggcacccgtttt
agggatattgtgcaattagtgaatagcttgatacaagtcatcttttttttgacacctatt
atttggttgccaagtgtattacccgatcggtatcagtatattattcaactcaatcctttc
gcacaatttatggaattattgcggaaccctctattaggtagccttccttcacactatacg
ctctttttcacgctatttataaccttactcggtttaagtgcagcgtttatgctctttgcg
cgttgccgcgctagaattgcttattggctataa
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