Candidatus Rickettsiella viridis: RVIR1_05850
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Entry
RVIR1_05850 CDS
T05765
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RVIR1_05850 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvi03019
]
RVIR1_05850 (rnc)
03009 Ribosome biogenesis [BR:
rvi03009
]
RVIR1_05850 (rnc)
03036 Chromosome and associated proteins [BR:
rvi03036
]
RVIR1_05850 (rnc)
Enzymes [BR:
rvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RVIR1_05850 (rnc)
Messenger RNA biogenesis [BR:
rvi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RVIR1_05850 (rnc)
Ribosome biogenesis [BR:
rvi03009
]
Eukaryotic type
90S particles
RNase
RVIR1_05850 (rnc)
Prokaryotic type
rRNA processing factors
RVIR1_05850 (rnc)
Chromosome and associated proteins [BR:
rvi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RVIR1_05850 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BBB15087
UniProt:
A0A2Z5V722
LinkDB
All DBs
Position
609043..609735
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AA seq
230 aa
AA seq
DB search
MVRSEVATLCKHLGYQFKNPELLEDALSHRSFRGNKNNERLEYLGDAALNFVIAAALFRQ
NIRAREGELSRLRANLVRGETLTDLAKEFELGKYLRLGAGELKTGGAQRKSILADGMEAV
VGAIYLDGGFAACETCILRWYETRLENVESLPDLKDPKTRLQEYLQARKLPLPLYTVLML
EGPAHQQIFKVECQVNGLPNKAIGIDSSRRRAEQKAAEKILAELESASEL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgagatcagaagtagccacgctatgtaaacacttaggatatcaatttaaaaatcct
gaattattggaagacgcattgagccatcgtagttttcgcggtaataaaaataacgagcgt
ctagaatatttaggggatgcggcacttaattttgtgattgcggcggctttatttaggcaa
aatattcgtgcacgggaaggcgaattaagtcgtttacgtgcgaatctggttcgtggggaa
acattaacggatttagcaaaagaatttgaattaggaaaatatttacgcttaggggcaggt
gaattaaaaaccggtggcgcgcaacgtaaatccattttagccgatggtatggaagctgtc
gtgggtgctatttatttggatggtgggtttgcagcatgtgaaacctgtattctgcgttgg
tatgaaacacgcttagaaaatgtagaatcattacctgatttaaaagatcctaaaacccgc
ttacaagaatatctacaggcgcgtaagctgcctttacctctttataccgtgttaatgtta
gaagggcctgcacatcaacagatatttaaagtggagtgccaagtcaatggattgccaaat
aaagcgataggcatagacagtagtcgtcgacgtgcagaacaaaaagcggcggaaaaaatt
ttagcggaattagaatccgcttctgaactttaa
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