KEGG   Candidatus Rickettsiella viridis: RVIR1_05850
Entry
RVIR1_05850       CDS       T05765                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rvi  Candidatus Rickettsiella viridis
Pathway
rvi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    RVIR1_05850 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvi03019]
    RVIR1_05850 (rnc)
   03009 Ribosome biogenesis [BR:rvi03009]
    RVIR1_05850 (rnc)
   03036 Chromosome and associated proteins [BR:rvi03036]
    RVIR1_05850 (rnc)
Enzymes [BR:rvi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     RVIR1_05850 (rnc)
Messenger RNA biogenesis [BR:rvi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RVIR1_05850 (rnc)
Ribosome biogenesis [BR:rvi03009]
 Eukaryotic type
  90S particles
   RNase
    RVIR1_05850 (rnc)
 Prokaryotic type
  rRNA processing factors
   RVIR1_05850 (rnc)
Chromosome and associated proteins [BR:rvi03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     RVIR1_05850 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: BBB15087
UniProt: A0A2Z5V722
LinkDB
Position
609043..609735
AA seq 230 aa
MVRSEVATLCKHLGYQFKNPELLEDALSHRSFRGNKNNERLEYLGDAALNFVIAAALFRQ
NIRAREGELSRLRANLVRGETLTDLAKEFELGKYLRLGAGELKTGGAQRKSILADGMEAV
VGAIYLDGGFAACETCILRWYETRLENVESLPDLKDPKTRLQEYLQARKLPLPLYTVLML
EGPAHQQIFKVECQVNGLPNKAIGIDSSRRRAEQKAAEKILAELESASEL
NT seq 693 nt   +upstreamnt  +downstreamnt
atggtgagatcagaagtagccacgctatgtaaacacttaggatatcaatttaaaaatcct
gaattattggaagacgcattgagccatcgtagttttcgcggtaataaaaataacgagcgt
ctagaatatttaggggatgcggcacttaattttgtgattgcggcggctttatttaggcaa
aatattcgtgcacgggaaggcgaattaagtcgtttacgtgcgaatctggttcgtggggaa
acattaacggatttagcaaaagaatttgaattaggaaaatatttacgcttaggggcaggt
gaattaaaaaccggtggcgcgcaacgtaaatccattttagccgatggtatggaagctgtc
gtgggtgctatttatttggatggtgggtttgcagcatgtgaaacctgtattctgcgttgg
tatgaaacacgcttagaaaatgtagaatcattacctgatttaaaagatcctaaaacccgc
ttacaagaatatctacaggcgcgtaagctgcctttacctctttataccgtgttaatgtta
gaagggcctgcacatcaacagatatttaaagtggagtgccaagtcaatggattgccaaat
aaagcgataggcatagacagtagtcgtcgacgtgcagaacaaaaagcggcggaaaaaatt
ttagcggaattagaatccgcttctgaactttaa

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