Candidatus Rickettsiella viridis: RVIR1_06470
Help
Entry
RVIR1_06470 CDS
T05765
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rvi
Candidatus Rickettsiella viridis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvi03032
]
RVIR1_06470 (gyrA)
03400 DNA repair and recombination proteins [BR:
rvi03400
]
RVIR1_06470 (gyrA)
Enzymes [BR:
rvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RVIR1_06470 (gyrA)
DNA replication proteins [BR:
rvi03032
]
Prokaryotic type
DNA Topoisomerases
RVIR1_06470 (gyrA)
DNA repair and recombination proteins [BR:
rvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RVIR1_06470 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BBB15145
UniProt:
A0A2Z5UVR0
LinkDB
All DBs
Position
679918..682503
Genome browser
AA seq
861 aa
AA seq
DB search
MYEWVFMTESVVANEIIPVTIEKELKQSYLSYAMSVIVGRALPDVRDGLKPVHRRILFAM
SELGNDWNKPYKKSARVVGDVIGKYHPHGDGAVYDAIVRMAQIFSLCSVLIDGQGNFGSI
DGDSAAAMRYTEIRMSKLAHALLADLDKDTVDFAPNYDGTEQIPVVLPTRIPNLLVNGSS
GIAVGMATNIPPHNLGEVIDACLAMIGDPELSIDHLINLIKGPDFPTAGLIYGRKGIVEA
YHTGRGRVFVRARTQFELDEKTNKQRIIVTELPFQVNKAKLVEKIAELVKEKRIEGITAL
RDESDKDGMRVVIEVRRGENADVLLNNLFSQTQLQVTFGINMVALVDGRPALLNLKQFIE
AFLSHRREVVTRRTLFDLRKARERAHILEGLGIALANIDPMIALIKAAKDPSSAKQQLLQ
QDWQLGVVAEMLRKVPVSEGKRLTEKELSLYGLISETQRYRLSPEQAQAILDLRLHRLTG
LEQDKILNEYREQLTLINDLLEILNNPDRLRQVVREELCAVREEFLDARRTEIVTVDAEI
NEEDLIPSEDVVVTLSHDGYIKRQALDVYQAQRRGGRGKSSGDVKEEDFIEHLLIANTHA
TLLCFSSLGKVHWLKVYKLPEGSRAAKGRPIVNLLSLNTDERIHAVLAVHHFDPEQAIFM
ATANGTVKKTSLIDFSRPRNDGIIAIDLREGDRLVGVALTDGHQDVLLFTDAGKVIRFNE
SKVRAMGRTACGVRGVKLQEGQRVISLIIAKPDGQILTATSQGYGKRTPIDDHRLTGRGG
SGVVALKITERNGNVVAAVQVFPEDEVMLITNKATLVRTRVEEIRSAGRHSQGVRLIRLN
QGETLVGLERIEEEILDETIG
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgaatgggtttttatgactgagtcagtagtagccaacgaaattattcctgtcacg
attgaaaaagagcttaagcagtcttatctgtcttatgcgatgagcgttatcgttggtcgt
gccttacctgacgttcgtgatggcttaaagcctgttcaccgacgtattttatttgccatg
agcgagctggggaatgattggaataagccctataaaaaatcagcgcgtgtggtaggggat
gtgattggtaagtatcatccacatggtgatggggcggtctatgatgcgattgtacgtatg
gcgcaaattttttcgctgtgctcagtcttgatcgatgggcaaggtaactttggttccata
gacggcgattctgctgcggcgatgcgatataccgaaattcgtatgtcaaagctagcgcat
gccttactcgcggatttagacaaagacacggttgattttgcaccgaactatgatggaacc
gagcagattcccgtcgtattacctactcgtatacctaatttattggtgaatggttcttct
ggtatcgcggtagggatggcgacgaatattccgccgcataatctgggtgaggtcattgat
gcatgtttggcaatgatcggtgaccctgagttgagcattgaccatttaatcaacttgata
aaagggccggatttcccaacggcaggcttaatttatggcagaaaaggcattgtagaggcc
tatcatactggaagagggcgcgtatttgttagagccagaacgcagtttgaactggatgaa
aaaactaataagcagcgcattattgtgaccgagcttccttttcaggttaataaagccaaa
ttagtagaaaaaattgctgaattagtcaaagaaaagcgcatcgaaggcattaccgcgtta
cgtgatgagtctgataaagacggtatgcgcgtagtgattgaggtacgacgcggtgaaaat
gctgatgtactgttgaataatctattttcgcaaacacaattacaagtgacatttggtatt
aatatggtggccttagtcgatggcagaccggcactactcaatctgaagcaattcatcgaa
gcatttttatcccatcgtcgcgaggtcgtcacacgacgcacgttgtttgatttacgtaag
gcgcgtgaacgtgcccatatcttagaaggattagggattgctttagcgaatattgatcct
atgatcgcattaatcaaagccgctaaagatcctagttcagccaaacaacaactcttgcag
caagattggcaattaggcgtggtcgcagagatgctgcgcaaagtacctgtatccgaaggt
aaacgactaactgaaaaagaacttagtctgtatggtcttatctcagaaactcaacgttac
cgcttatcacccgaacaagcacaagctattttagatttgcgtttacaccgtttaacagga
ttagaacaagataaaatcttgaatgaataccgtgaacagttaacactgatcaatgatcta
ttagaaattcttaataaccccgatcgtttgcgtcaggtggtgcgtgaagagttatgtgcg
gtcagagaagagtttttagatgcacgtcgtactgaaattgtcacggtggatgcagaaatt
aatgaagaagatttaatcccatctgaagatgtcgttgtgacactatcacacgatggttat
atcaaacgtcaagcattagatgtgtatcaagcacaacggcgtggtggcagaggaaaatct
tccggtgatgtcaaagaagaagattttatagagcatctattgattgcgaatacacatgct
actttattgtgtttctcaagtttgggtaaagtgcattggcttaaagtgtataaattaccg
gaaggaagtcgagccgcgaaaggaaggcccattgttaacctattaagtttgaatacggat
gaacgtattcatgcggtattggcggtgcatcattttgatcctgagcaagctatttttatg
gcgaccgcgaatgggaccgtcaagaaaactagtttgattgatttttcacggccacgaaat
gacggtattattgcgattgatttgcgcgaaggtgatcgtctagtaggtgttgcattaacg
gatgggcatcaagatgtcttattgtttaccgatgcagggaaagtgattcgttttaatgaa
agtaaagtacgcgcgatgggacgtacggcatgtggagttagaggcgttaaattacaagag
ggacaacgcgttatctcattgattattgctaaacccgatgggcagatattaacggcaaca
agccagggctatggcaaacgtacgccaatagacgatcatcgtttgacgggtcgcggtggt
agtggtgtggtggcacttaaaataaccgaacgcaatggtaatgtcgtagcggctgttcag
gtatttcctgaagatgaagttatgctaatcaccaataaagcgactttagtacgtacgcgt
gtagaagaaattcgtagtgcgggacgacactcgcaaggcgtgcgtttgattcggttaaat
caaggcgagacattggtcggtttggaacgaatagaagaagaaattcttgatgaaacaata
gggtaa
DBGET
integrated database retrieval system
