Candidatus Rickettsiella viridis: RVIR1_07360
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Entry
RVIR1_07360 CDS
T05765
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RVIR1_07360 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvi03400
]
RVIR1_07360 (uvrA)
DNA repair and recombination proteins [BR:
rvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RVIR1_07360 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RVIR1_07360 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
AAA_16
RsgA_GTPase
nSTAND1
AAA_25
AAA_33
AAA_21
AAA_23
DnaJ_CXXCXGXG
APS_kinase
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BBB15225
UniProt:
A0A2Z5UVY3
LinkDB
All DBs
Position
776782..779661
Genome browser
AA seq
959 aa
AA seq
DB search
MDTIQIRGARTHNLKNIDLDIPRGQLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLSSY
ARQFLSMMEKPDVDHIEGLSPAIAIDQKSTSHNPRSTVGTVTEIYDYLRVLFARVGQPHC
PIHGTSLAAQSVSQMVDTLMVLPNETGLSILAPLVRGRKGEYKQLFDHLRSQGYLRVRID
GKLQELDQLSSLNAKQKHTIEVVVDRGIKIKPENRLRLSESLATAASLSEGLVMVVVQPD
ATNKKPQELVFSERFACTECGYSISELEPRLFSFNNPAGACPQCDGIGYEHIFDSEKILS
HPEKSLAKGAIQGWNAQNPYYFSLLTALAKHYDFSLDKPFDKLPKNIQKMILNGSGEEEI
NFQYRTEKGHTYSKKKAFEGVIPMIQRRYQETESQMVRDELARYLVLNPCSACGGTRLKE
AARNVFVADKSIAQWAALPIDQLRTRFEKLNLSGQRAEIAKGLKKEIIDRLKFLIDVGLN
YLSLDRSADTLSGGESQRIRLASQIGSGLVGVMYILDEPSIGLHQRDNERLLNTLLHLRN
LGNTVIVVEHDEEAIRHADYVVDMGPGAGVHGGQVIAQGSPAAIMRNPDSLTGKYLSGER
HIDAPKKRHKPNQKHLLKLIGASGNNLKNIDITIPLGLMTCITGVSGSGKSTLINDTLYP
ITARALNNATLIQPAPYTEITGLEQLDKLIDIDQSPIGRTPRSNPATYIGLFTPIRELFA
ATPESRSRGYKPGRFSFNVKGGRCEACEGDGVLKVEMHFLADIYVQCDVCKGKRYNRETL
EIQYKGKNIHEILEMTVEDAAIFFKPVPVLARKLQMLMEVGLSYIRLGQSAPTLSGGEAQ
RIKLAKELSKRDTGQTLYILDEPTTGLHFYDIEQLLKVLYRLRDHGNTVVIIEHNLDVIK
TADWIIDLGPEGGNKGGEVVCEGTPEQVAKNPASYTGKFLKPLLGKQSGLSAEKNGRHG
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggatactattcaaattcgcggtgcacgtacgcataatctaaaaaatatcgatttagac
ataccccgcggacaactcgttgtcatgacgggcttatctggttcgggtaaatcgtcttta
gcgtttgatacgctctatgcggaaggacaacgtcgctatgtggagtctttatcctcctat
gcacgtcagtttctctcgatgatggaaaagcccgatgtggatcacattgaagggctttct
ccagccattgctatcgatcaaaaatcgacatcgcataatccacgttctacggtgggaaca
gtcaccgaaatctatgattacttacgtgttttatttgccagagtagggcagccgcattgc
ccgattcacggtactagcttagcggcgcaaagtgttagccaaatggtagataccttgatg
gtgttaccaaatgagacggggctttcgatcttagcgccattggtgcgcgggcgtaaaggc
gaatacaaacaattgtttgatcacttgcgtagccaaggttatttgcgcgtacgtattgat
ggaaaattacaagaattagatcagctttcttctttaaatgctaaacaaaaacatacgatt
gaagtagtagtggatagaggcattaaaataaaacctgaaaatcgattgcgcttaagtgaa
tccttggcaaccgccgcttcactcagtgaaggtttagtcatggtagtggtacaaccggat
gccactaataaaaaaccacaggaattagttttttcagaacgatttgcttgtacagaatgt
ggttatagtatcagcgaactagagccacgtttattttcatttaataatccagccggagct
tgtccacaatgtgatggtattggctatgaacacatttttgattcggaaaaaatactgtcg
caccctgaaaaaagcttagctaaaggcgcgatacagggctggaacgcgcagaatccgtat
tatttttcgctgttaaccgcgttagccaagcattacgacttttctctggataaaccattc
gataagttgccaaaaaatattcaaaagatgattttaaacggcagcggcgaagaggaaatt
aatttccaataccgtactgaaaaaggacatacctatagcaaaaagaaagcatttgaaggc
gtgataccgatgatacaacgtcgctatcaggaaacggaatcacaaatggtcagagacgaa
cttgcgcgttatttagtattaaacccttgctcagcatgcggtggtacacgtttaaaagaa
gctgcgcgtaacgtgtttgtcgctgataaatccattgcacaatgggcggcattaccgatt
gatcaactgcgaacacgttttgaaaaattaaacttatctggacaacgtgctgaaattgcc
aaaggtttaaaaaaagaaatcattgatcgtttaaaatttttaattgatgtgggcttaaat
tatttatcattagaccgtagtgccgataccttatcaggcggtgaatcgcaacgaattcga
ctggcgagtcaaattggttcgggtttagtgggtgtgatgtatattttggatgaaccttcg
attggcttacaccaacgagataatgaacgattgctcaataccttattacatttacgcaat
ttaggtaatacagttatcgtggtagaacacgatgaagaagctatacgccatgccgattat
gtggtggatatgggtcctggtgccggtgtacatggcggacaggttattgcacaaggctca
cccgctgccattatgcgcaatccagattccttaactggaaaatatctttctggtgaacgt
catatcgatgcacctaaaaaacgtcataaacccaatcaaaaacacttactgaaattgata
ggggcttccggtaataatttaaagaatatcgatattactattcctttgggtttgatgact
tgtattactggcgtttcgggttcaggtaaatccaccttaattaatgacacactttatccc
attaccgcgagagcattgaataatgccacgctgattcagcctgcgccttatactgaaatc
actggcttagaacaactggataaattgattgatattgatcaaagccctattggacgtact
cctcgttctaatccggctacgtatattggtctgtttacaccgatacgcgagttatttgca
gccacgccagaatcgcgctcacgcggctataaacccgggcggtttagctttaatgtcaaa
ggcgggcgttgcgaagcctgtgaaggagacggtgtactgaaggttgagatgcattttttg
gcggatatttatgtacagtgtgatgtctgtaagggtaaacgttataatcgagaaacctta
gagatccagtataagggtaaaaatatccatgaaattttagaaatgactgtagaagatgcg
gcgattttctttaagcctgttcctgtactggctagaaagctacaaatgctgatggaagtc
ggtctttcttatatccgtctcggccaaagtgcaccgacactctccggcggtgaagcgcaa
cgcattaaactagcgaaagaactcagtaaacgcgatacgggccaaacgctttatattctt
gatgagcccacaacaggtctacatttttacgatatcgaacaattgttaaaggttttatat
cgtttacgcgatcacggtaatacggtagtgattatcgaacataatctggatgtcattaaa
acggcggattggattatcgatttaggtcccgaaggcggaaataagggcggggaagttgtt
tgcgaaggaacaccagagcaagtggctaaaaatccggcttcttatactgggaaattttta
aaacccttgctgggaaaacaaagcggcttgtcagccgaaaaaaatggccgtcatggttaa
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