Candidatus Rickettsiella viridis: RVIR1_07840
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Entry
RVIR1_07840 CDS
T05765
Symbol
potD
Name
(GenBank) putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RVIR1_07840 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvi02000
]
RVIR1_07840 (potD)
Transporters [BR:
rvi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
RVIR1_07840 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
BBB15273
UniProt:
A0A2Z5UWA8
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All DBs
Position
complement(821711..822667)
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AA seq
318 aa
AA seq
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MYNWSSYISSDVLKEFTQETGIKVNYATYDSNETMYAKLKANPTSGYDIVVPSTYFVDRM
RKQGMLQPLDKAKLSNFKYLNPALLNKAYDPDNRYSIPYFWSVTGIAVNTHYHALAGIQN
WADFWKPEYRKQLLLLDDMHEVFSVALLVLGYSPNDGNPEHIRQAYLKLRQLMPNVRLFN
ADGVKSLFIDEDLTLGMGWNGDIYQAAQENPAIRFVYPKDGFVISIDSMAIPIGATHLNN
AYRFINFILRPDIAKKISLATGYASPNEGAVKLMPKSILSNPMIYPAQSILKRSVVQADV
GDAESIYQKYWELLKIGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgtacaactggtcaagttatatttccagtgatgttttaaaagaatttactcaagaaact
ggcattaaagttaattatgcgacctatgatagtaatgaaacgatgtatgctaaactcaag
gcaaatcctacttcaggttatgatattgtcgtgccttcgacctattttgttgatcgtatg
cgcaaacaagggatgctgcagcctttagataaagccaagctgagtaattttaagtatcta
aacccagcattattaaacaaagcgtatgatcctgataatcgctatagtattccttatttt
tggagtgtcactggcattgccgtgaatacgcactatcatgcgcttgctgggattcaaaat
tgggctgatttttggaagcccgagtatcgtaaacaattacttttgttagatgatatgcat
gaggtattttcggttgctttactggtcttaggctattctccgaatgacggcaatcccgag
cacattcgccaggcttatttaaaactcaggcagctgatgccgaatgttcgattattcaat
gcggatggggtaaagtcattgtttattgatgaagatttgactttgggtatgggttggaat
ggtgatatttatcaagccgctcaagaaaacccggcgattcggtttgtttaccccaaggac
ggttttgttatttctattgatagtatggccattcctatcggcgcaacacacctgaataat
gcctatcgttttataaattttattttacgtcctgatatcgccaagaaaattagtttagca
acgggctatgcgtcgccgaatgagggggctgttaaattgatgccaaaatcaattttgagc
aatcccatgatttaccccgctcagtcgatcttaaagcgtagtgtggtgcaagcagatgtg
ggggatgccgaaagtatttatcaaaaatattgggagttgttgaaaataggcggttaa
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