Candidatus Rickettsiella viridis: RVIR1_08100
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Entry
RVIR1_08100 CDS
T05765
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RVIR1_08100 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvi01007
]
RVIR1_08100 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvi03016
]
RVIR1_08100 (aspS)
03029 Mitochondrial biogenesis [BR:
rvi03029
]
RVIR1_08100 (aspS)
Enzymes [BR:
rvi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RVIR1_08100 (aspS)
Amino acid related enzymes [BR:
rvi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RVIR1_08100 (aspS)
Transfer RNA biogenesis [BR:
rvi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RVIR1_08100 (aspS)
Prokaryotic type
Other AARSs
RVIR1_08100 (aspS)
Mitochondrial biogenesis [BR:
rvi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RVIR1_08100 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BBB15299
UniProt:
A0A2Z5UUR5
LinkDB
All DBs
Position
complement(846151..847926)
Genome browser
AA seq
591 aa
AA seq
DB search
MTQRTHYCSQLGEELLQKTVQVRGWVHYRRDHGGIIFVDLRDRSGLLQLVFNPEQTELFK
QAESLRNEYVIAVEGQVSLRPVGTENKQLKSGKVELQVAKLTILNTSLALPFAIDSYTPV
SEEVALKYRYLDLRRPDMQARFILRTKVVSFIRRFLEEKNFLELETPILTKATPEGARDY
LVPSRVHPGSFYALPQSPQLFKQLLMMSGFDRYYQVVRCFRDEDLRADRQPEFTQLDMEL
SFCDEKTIQDLTENLISSLFKEILQVSLPHPFPRMSYQEAMQRYGSDKPDLRISLELIDI
ADLVQGIEFKVFADPAADPQGRVVALRIPNAVDLTRKTIDEYTQYVSIFGAKGLAYIKVI
DRNKGLEGLQSPILKFIPEAVVTAILERVDAQTGDIIFFGAGKSKIVSDSLGALRVKCGH
DFKLVKAGFAPLWVVDFPLFEFDEKEQRLQALHHPFTAPQVADVDELQAKSATCLSRAYD
MVLNGCEIGGGSIRIHDSHVQAAVFDLLAISEQEQKDKFGFLLEALKYGCPPHGGIAFGL
DRLVMLMTGASSIRDVILFPKTQAARCPLTEAPSAVSLAQLNELSIQVRKK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaagaacacattattgtagccaattaggcgaggaactcctgcaaaaaaccgtt
caagtacgggggtgggttcactataggcgtgaccacggcggtattatttttgttgattta
cgtgaccgtagcggacttttacaattggtctttaaccctgaacaaactgaactttttaaa
caagctgaaagcttacgtaatgaatatgtgattgcggtggaaggtcaggtcagcttgcgt
cctgtgggtacggaaaataagcagctgaaatccggtaaagtagagcttcaggtggcaaag
ctaactattttaaatacttcattggcattgccttttgctatcgatagttatactccagtg
agtgaagaggtggcgctgaagtatcgttatctggacttacgccggccggatatgcaagca
cggtttattttacgtaccaaagtggttagctttattcgtcgctttttggaagaaaaaaac
ttcttagaattggaaacacctattttaaccaaagccacaccggaaggcgcgcgtgattat
ttagtgcctagccgcgttcatcccggttcattttatgctttacctcaatccccacaatta
tttaaacaattattgatgatgtcgggatttgatcgttattatcaagttgtgcgttgtttt
cgtgatgaagacttgagagcggatcggcaacctgaatttacccagcttgatatggaactc
tcgttttgtgatgagaaaaccattcaggatttaactgaaaatctcatttcttcgttgttt
aaagaaattctacaggtttcattgccgcatccttttccgcgcatgagctatcaggaagcg
atgcaacgttatggtagtgataaacctgatttacgtatttctttagaattaattgatatc
gctgatttagttcaagggattgaatttaaggtttttgctgatcccgctgcagatccacaa
ggtcgggttgttgcactgcgtattccgaatgctgttgatttaacgagaaaaacgattgac
gaatacacgcagtacgtgagtatttttggcgccaaaggcttggcgtatattaaagtaatt
gatcggaataaaggcttggaagggctgcaatcaccgatacttaaatttattcctgaagcg
gtggtgacggctattttagaaagagttgatgctcaaaccggcgatattattttctttggt
gctggcaaatccaaaatcgtgagtgattcattaggtgcgttgcgtgttaaatgcggacat
gattttaaattagtgaaagccggttttgcgccgttatgggtcgtcgattttcctttattt
gaattcgacgaaaaagaacagcgtttacaagcattgcaccatccttttacagcgcctcaa
gtagctgatgtggatgaactacaagcgaaaagtgccacctgtctttctcgtgcttatgat
atggtacttaatggctgtgagattggagggggatccattcgtatccatgattctcatgta
caagccgctgtttttgatttattagcgattagcgaacaagaacaaaaagacaaatttgga
tttttattggaggcgctaaaatacggttgtcctcctcatggcggtattgcgtttggtttg
gatcgcttagtcatgttaatgaccggtgcatcttctattcgcgatgtgattttatttccg
aaaacgcaggcggcccgctgtcctttaacagaagcgcccagtgcggtgagtcttgcacaa
ttgaatgaattatcgattcaagttcgaaaaaaatag
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