Candidatus Rickettsiella viridis: RVIR1_08450
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Entry
RVIR1_08450 CDS
T05765
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00470
D-Amino acid metabolism
rvi00550
Peptidoglycan biosynthesis
rvi01100
Metabolic pathways
rvi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RVIR1_08450 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RVIR1_08450 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RVIR1_08450 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rvi01011
]
RVIR1_08450 (ddl)
Enzymes [BR:
rvi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RVIR1_08450 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rvi01011
]
Precursor biosynthesis
Amino acid ligase
RVIR1_08450 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
TTL
Motif
Other DBs
NCBI-ProteinID:
BBB15334
UniProt:
A0A2Z5UV27
LinkDB
All DBs
Position
complement(880977..882101)
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AA seq
374 aa
AA seq
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MIKQAFYFMVLPVKKIKVAVLYGGRSAEHEVSLQSAAAVIKNLDKNKFEVIPVSIDKQGH
WLVNDLKQFPLDESAPVKTSVSKELFVPEAIINQTESFFDVVFPVLHGSFGEDGTMQGLL
EILGLPYVGANVLGSAIGMDKVIAKRLAQADKIPVVPFVTFNTGEWKISQTALQKRIEKE
LDYPLFVKPVNAGSSLGITKVKKAADLLAAVNLAAEFDTKILVEQALVVREIEVAVLENL
SFGEQPLVSVLGEINPQHEFYSYEAKYLDDKGAELIIPAVLQERQSEKIKKLAAKVFSSL
ACQGMARVDFFIEEATQNVYLNEINTIPGFTKISMYPKLWEASGLSYQQLLTHLIELALA
RHARLSHLKQSQSL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaagctttttattttatggttttacccgttaaaaaaatcaaagtcgctgtt
ctttatggtggccgatccgctgagcatgaagtttctttacagtccgctgcggctgttata
aaaaatttagataaaaataaatttgaagtcattcctgtttctattgataagcagggacat
tggttagtgaatgatctgaaacaatttcctttagatgaatctgcccctgtaaaaacaagt
gtatcaaaagaactttttgtgccagaggcgattattaatcaaacagaatctttttttgat
gtggtttttcctgtgttgcacggttcttttggtgaagatggaacgatgcaaggcttattg
gaaatcttaggtcttccttatgtaggcgcgaatgtattgggatctgccatcggtatggat
aaagtgattgctaaacgtttagcacaagctgataaaattcctgttgttccgtttgttaca
tttaataccggcgaatggaaaataagccaaactgcgctgcaaaaaaggattgaaaaagag
ctagattatcccttgtttgttaagccagtgaatgcgggctcaagtttagggattactaaa
gtgaaaaaggccgctgatttgctggcggcggttaatctagcggcggaatttgatactaaa
attttagttgaacaagccttagtagtacgtgaaattgaggtagctgttttagaaaattta
tcgtttggtgaacaacctttagtcagtgttttaggtgaaattaatcctcagcatgaattt
tattcctacgaagccaaatatctcgatgataaaggtgcggagttgattattcctgctgtt
ctacaggaaaggcaatctgagaagataaaaaaattagcagcaaaggtttttagcagtttg
gcgtgccaaggtatggcgcgagtagacttctttatagaagaagcgacgcaaaacgtttat
ttaaatgaaattaataccattcctggttttactaaaattagtatgtatcccaaattatgg
gaagcatccggtctttcttatcagcaacttttaacacatctcattgaactagcgctggca
cggcatgcgcgtttatcgcatttgaaacaaagccaatcattataa
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