Candidatus Rickettsiella viridis: RVIR1_08560
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Entry
RVIR1_08560 CDS
T05765
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00540
Lipopolysaccharide biosynthesis
rvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RVIR1_08560 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rvi01005
]
RVIR1_08560 (lpxB)
Enzymes [BR:
rvi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
RVIR1_08560 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
rvi01005
]
Lipid A
RVIR1_08560 (lpxB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
BBB15339
UniProt:
A0A2Z5UUU7
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All DBs
Position
complement(892149..893342)
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AA seq
397 aa
AA seq
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MIQKDGELSGNTAENSSVKSIRIGIVAGELSGDLLAADLLKQLKIKGIAFVAEGIAGPEM
QKQGCRSLFPMETLSVMGLGEILKQLPQILGLRRQLIQHFIVNSPDVFIGVDAPEFNLGV
EKKLKQHGIKTIHYVSPSVWAWRRWRLKKIAKAVDLMLTLFPFEKRFYQENNIPVECVGH
PFADSIALETDVLQARKHLGLPESASIIALLPGSRRNEIDYLGRLFLETTQRCYAENPAL
VFVAAMVNQERAAQFTALKLAIAPQLPITLIQGQSRQVMASADVILLASGTATLEAMLLK
KPMVVAYRMSALSYWMAKCLINVDHIALPNLLANKTLVPEFIQENATPEKLAEALFYYLN
NSTVVSTLQKEFLILHHQLHCHASEKAVDALLKLLSD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatacagaaggatggcgagttgagcgggaacacagccgaaaattcaagtgtgaagagt
atacggattggtatcgtcgccggagagctatccggtgacttattagcagctgatttactc
aagcaattaaaaattaaaggaattgcctttgtcgcagaaggcattgccggtcctgaaatg
cagaaacaagggtgtcgttctttgtttcccatggaaaccctatctgtgatgggcttgggt
gagattcttaagcagcttcctcagatattaggtttacgtcgccaattaattcagcacttt
attgtgaattcgcccgatgtttttatcggtgttgatgcacctgaatttaatttgggcgta
gaaaaaaaattgaaacaacacggtataaaaaccatacactatgttagccccagtgtatgg
gcttggcggcgatggcgacttaaaaaaattgctaaggcggttgatttaatgttgaccctc
tttcctttcgaaaaacgattttatcaagaaaataatattccggtggaatgtgtgggacat
ccttttgccgatagtattgcgttagaaaccgatgttttacaggctagaaaacatttaggg
ttgcctgagtctgcatccattattgcattattaccgggaagtcgacgtaatgaaattgat
tatctaggtcgactatttcttgaaaccacacaacgttgctatgctgaaaatccagcgcta
gtttttgtggcagcgatggtgaatcaagaaagagcggcccagtttacagcgcttaaatta
gcgatagcaccccaactgccgatcacactgatacaaggacagtcgcgtcaggtaatggca
tcagcagatgttattttattggcatccggtacagccaccttagaagcgatgctacttaaa
aaaccgatggtcgttgcttatcgcatgagtgcgttgtcctattggatggcaaaatgttta
attaacgtggatcacattgcattgcctaatttattggctaataaaacgttagttcctgaa
tttattcaagaaaatgcaacacccgaaaaattggcggaggcattattttattatttgaat
aattccacagtcgtgagtacactgcaaaaagaatttttaatattgcatcatcaattgcat
tgtcacgccagtgaaaaagcagtcgatgcgttgcttaagcttttatcggattaa
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