Candidatus Rickettsiella viridis: RVIR1_09960
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Entry
RVIR1_09960 CDS
T05765
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rvi
Candidatus Rickettsiella viridis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvi03021
]
RVIR1_09960 (rpoH)
Transcription machinery [BR:
rvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RVIR1_09960 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
WXG100
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BBB15469
UniProt:
A0A2Z5UV76
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All DBs
Position
1047444..1048331
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AA seq
295 aa
AA seq
DB search
MEAPLNNTHLQTLYTTALPISSTDAYIARLKQIPVLTTQEETELAERYYTDHDLNAAKKL
VISNLRFVVHIAQTYTGYGLALADLIQEGNIGLMKAVKRFDPKVGVRLISFAVHWIKAEI
QEFILKNWRIVKIATTKAQRKLFFNLRKMKMRLGWFNQKEIEQVAQDLGVKPETVREMES
RLASHDMSLDIGNDDDSDSHANTYPLLGTHFEDKRYDPARLLEASDSAESSQSNLYQALA
QLDPRSQSIIRERWLAQPKATLQELANRYQVSAERVRQLEQKAIKELRIAIESII
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaggccccattgaataacacacacttacaaacactttatacgactgcccttccaatc
agcagtaccgatgcctatattgctaggcttaaacaaatccccgtgttaaccacccaggaa
gaaaccgaattagctgaacgctattatacggaccacgacctcaacgccgccaaaaaactg
gtcatttctaatctacgattcgtcgtgcatattgcacaaacctacaccggatatgggctt
gccctcgccgacctgattcaggaaggtaatatcggcttaatgaaagcagttaaacgcttt
gatcctaaagtcggtgtacgacttatttctttcgctgtgcattggattaaagctgaaatt
caagagtttattctgaaaaattggcgtatcgtcaaaattgccaccaccaaagcacaacgc
aaattattctttaatctgcgtaaaatgaaaatgcgtctaggctggtttaatcaaaaagaa
attgagcaggttgcacaggatctcggtgtaaaaccagaaacagtacgtgaaatggaatcg
cgtttagcctctcacgatatgagcttagatattgggaacgatgacgattcagattcccac
gctaacacttatccgttactcggtacgcattttgaagataagcgttacgatccagcacgc
ttattagaagcgagcgactctgcagaatctagccaaagcaatctctatcaagcactggcg
caattagatcctcgttcccaatccattattagagagcgctggctggctcaacctaaagct
actttacaagaattagcgaatcgttatcaggtttctgccgaacgtgtacgccaacttgaa
caaaaagccataaaagaactacgtattgcaatagagagtatcatatga
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