Candidatus Rickettsiella viridis: RVIR1_10520
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Entry
RVIR1_10520 CDS
T05765
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RVIR1_10520 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvi01007
]
RVIR1_10520 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvi03016
]
RVIR1_10520 (serS)
Enzymes [BR:
rvi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RVIR1_10520 (serS)
Amino acid related enzymes [BR:
rvi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RVIR1_10520 (serS)
Transfer RNA biogenesis [BR:
rvi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RVIR1_10520 (serS)
Prokaryotic type
RVIR1_10520 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
LPD22
FapA
OVT1
Motif
Other DBs
NCBI-ProteinID:
BBB15522
UniProt:
A0A2Z5V519
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All DBs
Position
complement(1118077..1119348)
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AA seq
423 aa
AA seq
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MLDPKLLRSHIEEIAERLKPRGYQLDIDQLKQLEAQRKALQMHTQELQNQSNQSAKAIGL
AKAKGEPVAVISEEAKTIKEQREVCERQLRNIKEQLEAIYLTIPNLPHVTVPAGKDEAQN
QTVRQWGEIPTFKFSPKDHVDLGQQSGGMDFEAAGKISGTRFVVLYGKLAKLQRALIQFM
LDVHTKEHGYEELYVPYIVNSSSLIGTGQLPKFADEQFALKGEQNFYLIPTAEVPVTNLA
RDVIFSADKLPKKYVTHTPCFRSEAGSYGKDTRGMIRQHQFEKVELIRFVKPEDSYSALE
ELTREAESILQKLKLPYRVVSLCTGDLGFSSAKTYDLEVWLPSQKTYREISSCSNFEAFQ
ARRLQARWRNVNNANAIELIHTLNGSGLAVGRTLVAIMENYQDVEGKIRVPDALKTYINE
DII
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcccaaacttttacgtagccatatcgaagaaattgcagaacggcttaaacca
cgtggttatcagctcgatatcgaccagctaaagcagctagaagcgcagcgtaaggcattg
caaatgcatacccaagaactgcaaaaccagagcaatcaaagtgccaaggcgatagggtta
gcgaaagcaaagggcgaaccggttgctgttatctcagaagaagcaaaaacgataaaagag
caacgtgaagtatgtgagcgccagctcaggaatataaaggaacagttagaagctatttat
ctgactatccctaatttacctcatgtcacagtaccggcaggcaaagacgaagcccaaaat
caaaccgtacgtcagtggggagaaattcctacttttaaattttcacccaaagatcatgtt
gatttaggtcagcaaagcggaggtatggactttgaagcagccggaaaaatatcaggcaca
cgctttgtggtgctgtatgggaaattagccaagcttcagcgtgccttgatccaatttatg
ttagatgttcataccaaagaacacggttatgaagaactttatgtgccttatattgttaac
agcagcagtttaattggcacaggtcagttgccgaaatttgcggatgaacaatttgcactg
aagggtgagcaaaatttttatttaattccaaccgccgaagtacccgttaccaacttggca
cgcgacgttattttttcagcggataaattacctaaaaaatatgtcacgcatacgccttgt
tttcgtagcgaagcaggctcttatggaaaagatacccgcggtatgattcgtcaacatcaa
tttgaaaaagtagagttaatccgatttgtaaaacccgaagatagttattcagctttggaa
gaactgacgagagaagcagaatccattctacaaaaactaaaactaccttatcgtgtggtt
tccctttgtacaggagatttagggtttagttcggccaaaacgtatgatttagaagtttgg
ctgcccagtcaaaagacttaccgtgaaatttcatcctgtagtaattttgaggcctttcaa
gcgcgtcggttacaagcccgttggcgtaatgtcaacaatgcaaatgcgattgaattaatc
cacaccttaaatggttctggattagcagtagggcgtacgctagttgcgattatggaaaat
tatcaggatgtagaaggaaagatacgagtgcctgacgcattaaagacatatatcaatgaa
gatattatttga
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