Candidatus Rickettsiella viridis: RVIR1_11930
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Entry
RVIR1_11930 CDS
T05765
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RVIR1_11930 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvi03019
]
RVIR1_11930 (groL)
03110 Chaperones and folding catalysts [BR:
rvi03110
]
RVIR1_11930 (groL)
03029 Mitochondrial biogenesis [BR:
rvi03029
]
RVIR1_11930 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvi04147
]
RVIR1_11930 (groL)
Enzymes [BR:
rvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RVIR1_11930 (groL)
Messenger RNA biogenesis [BR:
rvi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RVIR1_11930 (groL)
Chaperones and folding catalysts [BR:
rvi03110
]
Heat shock proteins
HSP60 / Chaperonin
RVIR1_11930 (groL)
Mitochondrial biogenesis [BR:
rvi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RVIR1_11930 (groL)
Exosome [BR:
rvi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RVIR1_11930 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RVIR1_11930 (groL)
Exosomal proteins of breast cancer cells
RVIR1_11930 (groL)
Exosomal proteins of colorectal cancer cells
RVIR1_11930 (groL)
Exosomal proteins of bladder cancer cells
RVIR1_11930 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF8753
Motif
Other DBs
NCBI-ProteinID:
BBB15655
UniProt:
A0A2Z5UWZ7
LinkDB
All DBs
Position
1263402..1265048
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AA seq
548 aa
AA seq
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MAAKVLQFGVEARASILRGVDILSEAVKVTLGPKGRNVILDKSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASHTSDEAGDGTTTATVLAQAILREGMKAVAAGMNPMDLKRGI
DTAVTSVVTELKKLSTPCSDNKASAQVGTVSANGDEAIGSIIADAMEKVGKEGVITVEDG
SGLENELDTVEGMQFDRGYLSPYFINNQQSMSCELENPYILLVDKKISNIREMLGILEGV
AKAGRSLLIIAEDVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKEMLQDIAILSKANV
IAEEVGLNLEKATIEDLGSAKRVVITKDNATIIDGQGEKGKIKDRIAEIKIQIEKTSSDY
DREKLQERLAKLSGGVAVIKVGAATETEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RTLSTLVNLKGSNTDQDMGIRIVRNALEAPLRQIVTNAGSEPAVIVDKITSGQGNFGYNA
ATGEYGDMLKMGILDPTKVTRTALQNAASIASLMITTECMVAELPKKEEGSGMPAGGMDG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagttttacaatttggtgtagaagcgcgtgcttctattctacgtggtgtc
gacatattatctgaagctgttaaggtaaccttgggtcctaaaggtcgcaacgttatttta
gacaaaagctttggtgctcctaccattacaaaagacggtgtttcagtcgcaaaagaaatt
gaactgaaagacaaatttgaaaacatgggcgcacaaatggttaaagaagtagcttcccat
acgtctgatgaagctggtgatggtactacgaccgcaactgttttagcacaagctatttta
cgcgaaggtatgaaggccgttgccgctggcatgaatcctatggatctgaaacgcggtatt
gataccgcggttacttcagttgtcactgaacttaagaaactttctacaccatgttctgat
aataaggcgagtgcgcaagtcggtactgtttcagcgaatggtgatgaggctatcggttct
atcattgcagacgcaatggaaaaagtaggtaaagaaggtgttatcacggtagaagatggt
tccggtttagaaaatgaactggataccgttgaaggtatgcaatttgatcgtggttactta
tctccgtacttcattaataatcaacaaagcatgagctgcgaattagaaaacccttacatc
ttattagttgataagaagatttctaatatccgtgaaatgctgggtattcttgaaggtgtt
gcaaaagccggccgttccttattaattattgctgaagatgtagaaggcgaagccttagct
actttagtagttaataccattcgcggtattgttaaggtttgtgcggttaaagcacctggt
ttcggtgaccgtcgtaaagaaatgttacaagatatcgctatcctcagtaaagcaaacgtg
attgctgaagaagtagggttaaatcttgaaaaagcaactatagaggacttaggttctgca
aaacgtgttgttatcactaaagacaatgcaactatcattgatggtcaaggcgaaaaaggc
aaaattaaagatcgtattgccgaaatcaaaatacaaatcgaaaaaaccagttctgattat
gaccgtgaaaagctacaagagcgtttagctaaattatcgggcggtgttgcagtgattaaa
gtaggtgcagcaactgaaaccgaaatgaaagaaaagaaagcgcgtgtagaagatgctctt
catgcaacccgtgcagcggttgaagaaggcgtggttcctggtggtggtgttgctttaatc
cgcacactcagtacccttgttaacttaaaaggtagcaataccgatcaagacatgggtatt
cgtattgtacgcaacgcacttgaagcgcctttacgtcagattgttactaacgctggttct
gaacccgctgttattgtcgacaaaatcacttctggccaaggtaactttggttacaatgca
gccaccggtgaatacggcgacatgctaaaaatgggtatcttagatccaacgaaagtaacc
cgtactgcactacaaaatgcagcttctattgctagtctaatgatcacaaccgaatgtatg
gttgctgaacttcctaagaaggaagaaggcagcggtatgccggctggtggaatggatggc
atgggtggtatgggcggaatgatgtaa
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