Candidatus Rickettsiella viridis: RVIR1_12270
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Entry
RVIR1_12270 CDS
T05765
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00300
Lysine biosynthesis
rvi01100
Metabolic pathways
rvi01120
Microbial metabolism in diverse environments
rvi01230
Biosynthesis of amino acids
Module
rvi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RVIR1_12270 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rvi01002
]
RVIR1_12270 (dapE)
Enzymes [BR:
rvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RVIR1_12270 (dapE)
Peptidases and inhibitors [BR:
rvi01002
]
Metallo peptidases
Family M20
RVIR1_12270 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
BBB15686
UniProt:
A0A2Z5UVP5
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All DBs
Position
1298417..1299550
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AA seq
377 aa
AA seq
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MLSLIELTQQLIACPSVTPKDAGCQTLLTEPLQHLDFRIEHLPFVDVNNFWARRGTKAPL
FVFAGHTDVVPPGPLEKWDTPPFESNIRNGLLYGRGSADMKGSLAAMLIACKKFISQHPN
HLGSIAWLITSDEEGPSINGTAKVIETLKNRKEKIDYCLVGEPTCEEKLGDTLKIGRRGS
LSGHLIIQGKQGHIAYPQLTKNPIHLFSSALVELLNTAWDDNPINPDFQTTSFQLSNINA
GTGAENVIPDNLDVKFNFRYSPVTSAEKLQAMLIRCLDKHKLDYQLNWQHGGKPFLSTEG
KLRMAAISSIKEITGHSPSISTTGGISDARFIAAGGTEVVEFGPCNRSIHQINECVSIAD
LEKLALIYESLLKKILL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgcttattgaactcacacagcaacttattgcatgcccttctgtaacacctaaa
gatgcaggttgtcaaactctcttaactgaacctttacagcatttagatttccgaattgaa
cacttaccgtttgtagatgtcaataatttctgggctagacgtggcacaaaagcaccttta
tttgtttttgcagggcatacagacgttgtgccgcctggcccgctagagaaatgggataca
ccaccttttgaatctaatattcgtaatggccttctttatggccgtggcagcgcggatatg
aaaggcagtctcgccgccatgttaatcgcttgcaaaaagtttatttcacaacatcctaac
cacctcggttctatcgcttggttaattaccagtgatgaagaaggtcctagtattaacggc
accgcaaaagtcattgaaaccttaaaaaatagaaaggaaaaaattgattattgcttagtc
ggagaacctacttgcgaagaaaaattaggcgatactttaaaaataggtagacgtggctca
ctatcaggtcacttaatcatacaaggaaaacaaggtcatattgcctatccacaattaact
aaaaatcctattcatctcttttcctctgccctggttgaattactcaacaccgcctgggat
gacaatccgattaatccagatttccaaacaaccagttttcaactctcaaatatcaacgcc
ggtacgggtgcagaaaacgtcattccagataatttagacgttaaattcaatttccgttac
tcaccggttaccagcgctgaaaaattacaagccatgttaatccgttgtttagacaaacat
aaattagattatcagctgaattggcaacatggtggtaaacctttcctcagcactgaaggt
aaattacgcatggcagcgatttccagcataaaagaaataacaggacattcaccttctatt
tctacaacgggcggtatttcagatgcgcgctttattgctgctggaggaactgaggtcgtg
gaatttggaccttgtaaccgaagtattcatcaaattaatgaatgtgtttcgatcgctgat
ttagaaaaattagctttaatttatgaatcattattaaaaaaaatattactttaa
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