Candidatus Rickettsiella viridis: RVIR1_12480
Help
Entry
RVIR1_12480 CDS
T05765
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi03030
DNA replication
rvi03430
Mismatch repair
rvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RVIR1_12480 (dnaQ)
03430 Mismatch repair
RVIR1_12480 (dnaQ)
03440 Homologous recombination
RVIR1_12480 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvi03032
]
RVIR1_12480 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rvi03400
]
RVIR1_12480 (dnaQ)
Enzymes [BR:
rvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RVIR1_12480 (dnaQ)
DNA replication proteins [BR:
rvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RVIR1_12480 (dnaQ)
DNA repair and recombination proteins [BR:
rvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RVIR1_12480 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BBB15705
UniProt:
A0A2Z5UX38
LinkDB
All DBs
Position
1322089..1322808
Genome browser
AA seq
239 aa
AA seq
DB search
MRQIILDTETTGREISAGHRVIEIGCLELIDRRLTKRHFHCYLNPGRDSEAGALAVHGLT
SEFLQDKPLFSSIVDELLEFLNGAELIIHNAPFDLAFLDNEIQLTKKNYKKVTHYCQVLD
TLPLARQLHPGQRNSLDALCKRYEIDNSKRDKHGALLDAELLARVYLAMTGGQTNLFDDN
AVINHSLISTENKKSITMHELPVLYANTEELNAHNRCLSTIHKTTGRCLWSNSDSKDIH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaatcattttagataccgaaacaacgggtagagaaatcagcgctgggcaccgc
gtcattgaaattggctgccttgaactcatcgatcgtcgattaacaaagcggcattttcat
tgttatctgaatccaggtcgcgacagcgaggcaggcgcactggctgtgcatggcttaact
agcgaatttcttcaagacaagcccttattttcatctattgttgatgaattattagaattc
ctcaacggcgctgaactaattatccataatgcaccgtttgatcttgcttttctcgataat
gaaatacaattaacgaaaaaaaattacaaaaaagtcactcattattgccaagtattggat
acacttcctttggcacggcaacttcaccctgggcaacgtaatagtttagatgccttatgt
aaacgttacgagatcgataactctaaacgtgataagcacggcgcactactcgatgctgaa
ctactagcacgcgtttatcttgcaatgaccggcggtcaaaccaatctatttgacgataat
gccgtcattaatcattctctcatctctaccgaaaataaaaagagcatcactatgcacgaa
cttccagtcctttatgcaaacacagaagagctaaatgcgcacaaccgctgtttatcaacg
attcataaaacgacaggtcgttgcttatggtctaacagtgattcaaaggatattcattaa
DBGET
integrated database retrieval system
