Candidatus Rickettsiella viridis: RVIR1_12780
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Entry
RVIR1_12780 CDS
T05765
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi03060
Protein export
rvi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RVIR1_12780 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RVIR1_12780 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rvi02044
]
RVIR1_12780 (secD)
Secretion system [BR:
rvi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RVIR1_12780 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
ACR_tran
Sec_GG
Fucosidase_C
Motif
Other DBs
NCBI-ProteinID:
BBB15732
UniProt:
A0A2Z5V5P1
LinkDB
All DBs
Position
complement(1351491..1353353)
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AA seq
620 aa
AA seq
DB search
MLNKYPLWKNILLVLLVVIGFIYAIPNLFPEQPAVQISPVATVNTDMGFLNAKVEQLIKT
GRIHPISQELDKQTIFLRFNNTDVQLKAKDILSVALGDDYTVAVNLLSSTPKWMQAIGAL
PMKLGLDLRGGVHFALEVDVNSVIAQRMQGLMKNIGENLQQANIRYTELIPVDQQLNLVF
PDANSLNKAKSLLERQFPEFLFTTQTVNQHYQLSLQWTEQGLTNLRQSAIDQTINTLRNR
INELGVAEPIVQQQGRNRILVDLPGVQDIARAQQILGGTATIEFRLVDVTHDARSAQTSG
AIPSGFELYHYQNQPVLLNKEIILTGNSITDSSTSFDESGRSAVSISLGGGGESYFHRIT
GENVGKPLAIVYVETKSTTKSVNGEIIHIPRKIERVISIATIQTALPPNFQVTGLTNTQE
ALNLSLLLRAGALPAPIYVVEQRTIGPQLGAENIHKGFISIVIGLILAIIFMAIYYGVFG
VIADIALAMNVVLLVALLSLLGMTLTLPGMAGIVLTVGMAVDANVLIFERIREELRNGAS
PQASIHAGYDRALATIIDANVTTLIAALVLFGIGTGSIKGFAVTLTLGLLTSMLTGVMLT
RALVNAWFGGRTVKHLPIGI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataaatatccactttggaagaatattttattggttttgctcgtagtgattgga
ttcatctacgccattcccaatctttttcctgaacaacctgctgttcagatttcccctgtt
gctacagtgaatactgatatggggtttttgaatgccaaagtggaacagcttattaaaaca
gggcggattcaccctattagccaagaacttgataaacaaactatttttttgcgttttaac
aatacggatgtgcagcttaaagcaaaggatattttatcggttgccttaggtgatgattat
acagtcgccgttaatttgctgtcttctacgccaaaatggatgcaagccattggagctctg
cccatgaaattaggcctcgatctgcgaggtggtgtgcattttgcactagaagtagatgtt
aacagtgttattgcacagcgaatgcaagggctgatgaaaaatattggcgaaaacctacag
caagctaatattcggtatactgaattaattcctgtggatcagcagttgaatcttgttttt
cctgatgcaaatagtttaaataaagctaaatctttattagaacgccagtttcctgaattt
ctatttactacacaaacggttaatcagcattatcagctttctttacagtggacagaacaa
ggcttgactaacttgcggcaatcggcgattgatcaaacgattaataccttacgcaaccgg
attaatgagctgggtgttgccgaacctatcgttcagcaacaaggcagaaatagaatttta
gttgatttgcccggtgttcaagatattgcgcgtgctcaacaaattttaggcggaacagcg
accatagagtttcgtttagttgatgtaacgcatgatgcacgtagtgcacaaacctcgggc
gctataccgtcgggttttgaactgtatcattatcaaaaccaacctgttttattaaacaaa
gaaattattttaacgggtaattcaattactgattcttcaaccagttttgacgagtctggc
cgttctgcggtcagtattagcctgggtggtggcggagagagttattttcatcgtattacc
ggtgaaaatgtcggtaaacctttagccattgtgtatgtagaaactaaatcaacaaccaag
tcagtgaatggtgagatcattcatattccgcgaaaaatagagcgggtgattagcattgca
accattcaaacagcgcttccaccgaacttccaagtgactggcttaacgaacacgcaagag
gcacttaatctttccttattattacgtgcaggggcattgccggcacctatttatgtagtt
gaacagcgaaccatcggtccgcaattaggtgcagagaatattcataagggatttatctct
attgttattggacttattttagccattatttttatggcgatttattatggtgtatttggg
gtgattgcagacattgctttagcgatgaatgttgttttattggttgcattattgtcccta
ttagggatgaccttaacgttgccaggtatggcaggaattgtattaaccgtcggtatggct
gttgatgccaatgtattgatattcgagcgtattcgtgaagagttacgcaatggtgcttca
ccgcaagcgagtattcatgcgggttatgatcgtgcactagcaactattattgatgccaat
gtgacaacactgattgcggcgttagttttgtttgggattggaacaggctctattaaaggc
tttgctgttactctgacattggggttacttacctctatgttaacaggcgttatgttaaca
cgggcactggttaatgcttggtttggtggccgaacagtcaaacacttacccataggtata
tag
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