Candidatus Rickettsiella viridis: RVIR1_12950
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Entry
RVIR1_12950 CDS
T05765
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi00470
D-Amino acid metabolism
rvi00550
Peptidoglycan biosynthesis
rvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RVIR1_12950 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RVIR1_12950 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rvi01011
]
RVIR1_12950 (murD)
Enzymes [BR:
rvi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RVIR1_12950 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rvi01011
]
Precursor biosynthesis
Amino acid ligase
RVIR1_12950 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BBB15744
UniProt:
A0A2Z5UWD0
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All DBs
Position
1368868..1370238
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AA seq
456 aa
AA seq
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MARFNASHRRLIIGLGETGLSCARYFSRHRLWRKRFALLDSRLDPPLLATFKKEFPHVPL
YLGPFDPQLLEQAKELIVSPGIDLNEPVIANTIAKTGIRPIGDIELFAQKARAPIIAITG
TNAKGTVTTLFGDMIHASQRTAKVGGNIGKPALDLLKGAKPSFYVLEISSFQLQTTYSLQ
AKIATILNISPDHLDRHKTLENYTQTKQRIYQRCKTAVWNQDDPNTHPHNQFKPKQILSF
GLKMVKPNSEKFGLQLSNKKIYLAKGNKRLIPVDKLFIKGKHNWANALAALTIGEAIQLP
LASMLEALCQFKGLTHRCQWIKEEKGVTWYNDSKATNVGATMAALQGLGPATRGKIVLIA
GGLGKGANFNLLKHSVKTHVKTAILIGQDAPLLKTALEHDTLTQDARDLAHAVSLAQQAA
SPGDAVLLSPACASMDMFKNYEERGNVFAQLVRGEP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttaatgcttctcaccggcgattaattattggcttaggtgaaactgggctt
tcctgtgcccgttattttagtcgccatcgtttgtggcgaaaacgttttgcattattagat
agccgtttagatccaccacttttagcaacgtttaagaaagaatttcctcacgtgccactg
tacttaggtcctttcgatccgcaattgttagaacaagcaaaagaattaattgtgagccca
ggcatcgatttaaatgaacctgttattgctaatacaatcgctaaaaccggcatacgtcct
atcggtgatattgaattgtttgctcaaaaagcacgtgcccccattattgcaatcaccggt
accaatgcaaaaggaaccgtaactaccttatttggtgatatgatccatgcttcacaacgc
acggcgaaagtaggcggaaatatcggcaaaccggctctagatttattaaaaggcgctaaa
cccagtttctacgtattagaaatttctagctttcaattgcaaaccacttattcactccag
gcaaaaatcgcaacgattctgaatattagcccggatcatctggatcgacataaaactcta
gaaaactatactcaaacaaaacaacgtatttaccaacgttgtaaaacggcggtgtggaat
caagatgatcctaatacacacccacacaaccagtttaaaccaaaacaaatcctcagtttt
ggtttaaaaatggtaaaacctaattcagaaaagtttggccttcaactatcaaacaaaaaa
atttacttagcgaaaggcaacaaacgtctcatacctgttgataaactttttatcaaagga
aaacataattgggccaatgcccttgccgcattaaccatcggagaagccattcaacttcca
ctagcctcaatgctggaagctttatgccaatttaaaggtctaacgcaccgttgccaatgg
attaaagaagagaaaggcgtcacctggtataacgattccaaagcaaccaatgttggtgca
accatggccgccttgcaaggtttaggccctgcaactcgaggaaaaattgttttaattgct
ggcggcctgggaaaaggcgctaacttcaatcttttaaaacacagcgttaaaacacatgtc
aaaacagctatattaattggccaagacgctcctttattaaaaacagcattggagcatgac
acattaacgcaagatgcccgtgacttagcacacgctgtttcattggcacaacaagccgcc
tcaccaggagatgctgtattgctatcgcccgcctgtgcgagcatggatatgttcaaaaat
tatgaagaacgtggcaatgtttttgcgcagctagtacgaggagaaccttaa
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