Candidatus Rickettsiella viridis: RVIR1_13310
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Entry
RVIR1_13310 CDS
T05765
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rvi
Candidatus Rickettsiella viridis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvi03400
]
RVIR1_13310 (phrB)
Enzymes [BR:
rvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RVIR1_13310 (phrB)
DNA repair and recombination proteins [BR:
rvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RVIR1_13310 (phrB)
Prokaryotic type
RVIR1_13310 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBB15778
UniProt:
A0A2Z5UW97
LinkDB
All DBs
Position
complement(1422993..1424408)
Genome browser
AA seq
471 aa
AA seq
DB search
MKGLVWFREDIRIHDNTALYQAAKSCTDGIVGIFVIDAGLWRQHRMAACRVRFMLSGLEE
LSASLQKRNIPLVIVQVNKTTDIAKIFQEYMKKYNLGTLFFNRQYELNELRRDKQICDYL
QKKYIQCNSYHDQTILAPGTVLTKKSNYFTVFTPYRKAWCYQLMNQENKIKINPLPKKNK
NLIVQSTEVPSHIIGFSTKIIWPSGEKEARRRLKQFIKNSLFNYQKYRDFPACFATSQLS
PYLSAGMISARECFLSAIFANNGELMTGSKGAITWMTELIWREFYKHLLCAFPRLSMHKP
FQLKTEKLPWRFNSKQMLAWKNGKTGYPIIDAAMRQLNQTGWMHNRLRMIVAMFFTKNLF
FDWRLGEDYFISHLIDGDLAANNGGWQWSASTGTDAAPYFRVFNPIRQSERFDPKGDFIK
KYCPELKAFDTHAIHDPYGRAPDLAKRCKYPKRIIDLNVSRRAAIKAFKML
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtcttgtttggtttcgagaagatatacgtattcatgataatacggcactttat
caggcagctaaaagctgcacggatggcatcgtcggtatttttgttattgatgctggttta
tggcggcagcaccgtatggcagcttgtagagtccggttcatgttatctggattagaagag
ttgagtgcttccctccaaaagagaaatatcccgcttgtaattgtacaagttaataaaaca
actgatattgctaaaatattccaagaatatatgaagaaatataatttagggactttattt
tttaatcggcaatatgagctcaacgaacttcgtagggataaacagatttgtgattattta
cagaaaaaatatatccagtgtaatagttatcatgatcaaactattttagcaccaggaaca
gtgttgacgaaaaaaagtaattattttactgtttttacgccttatcgaaaggcgtggtgc
tatcaactaatgaatcaagaaaataaaataaaaataaacccattacctaaaaaaaataaa
aatctaattgttcagtcgacggaagtacctagccatataataggattttctaccaaaatc
atttggccttctggcgaaaaagaagcacgacgtcgtctaaaacaatttataaaaaatagt
ttatttaattatcaaaaatatcgggactttcctgcttgttttgcaacaagtcaattgtcg
ccttatttaagtgcggggatgatatcagcaagggagtgttttttgtcagccatatttgca
aacaatggtgagttaatgacaggaagtaaaggtgcaattacttggatgactgaattaatt
tggcgtgagttttataaacacctattgtgtgcttttcctagactttccatgcataaaccg
tttcaattaaaaactgagaaattaccatggcggtttaatagcaagcaaatgttagcttgg
aaaaatggaaagacgggttatccaattattgatgcagcaatgcgacaattgaatcaaaca
ggttggatgcataatcgtttacgtatgatagtggcgatgttcttcactaaaaatttattt
tttgattggcgtttaggtgaggattattttataagccatctaattgatggtgacttagct
gcaaataatggtggatggcaatggagtgcttcaactggtacggatgcggcgccatatttt
cgtgtttttaatcctataaggcaaagtgagcgcttcgatccgaaaggcgactttattaaa
aaatattgtcctgaattaaaagcgtttgatacacatgctattcatgatccttatggccgt
gcgccagatttagcaaagcgctgtaaatatccaaaacggattatcgatcttaatgtttcg
aggcgagcagcaattaaagcatttaagatgctttaa
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