Candidatus Rickettsiella viridis: RVIR1_14720
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Entry
RVIR1_14720 CDS
T05765
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rvi
Candidatus Rickettsiella viridis
Pathway
rvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RVIR1_14720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvi03400
]
RVIR1_14720
Enzymes [BR:
rvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RVIR1_14720
DNA repair and recombination proteins [BR:
rvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RVIR1_14720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBB15910
UniProt:
A0A2Z5UXQ8
LinkDB
All DBs
Position
complement(1566568..1567269)
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AA seq
233 aa
AA seq
DB search
MVDTKKLKYLEKIGIDVWIPREQKLVKQTKAKDSPKKLDITRGEQIATMSWEALQLEVAR
CQACNLYKTRTNPVFGVGNPNADLLVIGEAPGANEDKQGEPFVGRGGQLLTNMLLSIGFK
REDIYIANILKSRPPNNRDPSPEEVKACTPFLLRQISLIKPKLILAVGRIAAHFLLATND
SMGNLRGKLFHYGDHKIPLRVTYHPAYLLRAPREKRKAWQDMQCIKKQLQGSQ
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggtagacacaaaaaagttaaagtatttggaaaaaataggtattgatgtatggatcccg
agagagcaaaagttagtgaagcaaacgaaggcaaaggatagccctaaaaaattagatata
acgagaggagagcaaattgccacaatgagctgggaggcattgcaattagaggtggcacgt
tgccaagcgtgtaatctttataaaacacgtactaatcctgtatttggtgtaggtaacccc
aatgccgatttattagtcattggtgaagcgccaggtgctaatgaggataaacaaggagaa
ccctttgtagggagaggcgggcaattattaacaaatatgttgttatcgattggttttaag
cgagaagatatttacatcgcaaatattttaaaatcacgccctccgaataatcgagatcct
tctcctgaagaggtgaaagcgtgtacaccctttcttttaaggcaaattagccttatcaaa
cccaagttaattttggcagtaggacgaattgccgcacattttttattagcgactaatgat
agtatgggaaatttacgtgggaaactatttcattacggcgatcataaaattcctttacgt
gtaacctatcatcccgcctatttacttcgtgcgccgcgtgaaaaaagaaaagcatggcag
gatatgcaatgtataaaaaaacagttacaaggaagtcagtaa
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