Rhododendron vialii: 131297945
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Entry
131297945 CDS
T09330
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131297945
03041 Spliceosome [BR:
rvl03041
]
131297945
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131297945
Spliceosome [BR:
rvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131297945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131297945
NCBI-ProteinID:
XP_058179154
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Position
8a:35044369..35050309
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AA seq
425 aa
AA seq
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MQHPRLKQQQQQALMQQAALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVG
NIHTQVTEPLLQEVFSSTGPVEGCKLIRKEKSSYGFIHYYDRRSAGLAILSLNGRHLFGQ
PIKVNWAYAGGQREDTSSHYNIFVGDLCPEVNDAMLFACFSVYPSCSDARVMWDQKTGRS
RGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGANDDKQSSDAKSVVELTNG
SSEDGKEAANNDVPENNPQYTTVYVGNLAPEVSQLDLHRHFHALGAGVIEEVRIQRDKGF
GFVRYSNHAEAALAIQMGNTPSLFFGKQIKCSWGSKPTPPGTSSNPLPPPAAAPIGGLSA
ADLLAYERQLAMSKMGGVHALMHPQGQHHPLKQAAMGLGAAGASQAIYDGGFQNVAAAQQ
LMYYQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacccgaggttgaagcagcagcagcagcaggccttgatgcaacaagctgctctc
ctccaacagcaatccttgtaccaccccggcctcttggccgctcctcagattgagcctatc
ccaagtggaaatctgcctcctgggtttgatccaagtacatgccgcagtgtgtatgtggga
aacattcacacacaagtgacagaacctctccttcaagaggtcttttcaagtactggcccg
gttgagggttgcaagcttattagaaaggagaagtcatcctatggattcattcattactac
gatcgcagatcagctgggcttgccatactgtctcttaatggaaggcacctgtttggtcag
cctatcaaagttaattgggcatatgctggtggtcaaagggaagacacgtcaagtcactat
aacatttttgttggtgatctctgccctgaggttaatgatgctatgctgtttgcatgtttc
tctgtgtatcccagttgctcagatgcaagagttatgtgggatcagaagactggtcggtca
agagggtttggatttgtttctttccggaatcaacaggatgctcaaagtgccattaatgac
ttaactggaaagtggcttgggagtaggcaaatacgttgtaactgggctacaaaaggtgct
ggagctaatgatgacaagcagagctctgatgccaaaagtgtggtggaactgacaaatggc
tcttcagaggatggtaaagaggcagctaataatgatgtgcctgagaataacccccaatac
accactgtctatgtcggcaacctagctccggaggtcagtcagcttgatctgcatcgccac
ttccatgctcttggggctggagtgatcgaggaagttcgcatccaacgtgataagggcttt
ggttttgtgaggtacagtaaccatgctgaggcagctctggccatacagatgggtaataca
ccgtcccttttctttggcaagcaaatcaagtgctcatggggtagcaagccaactccaccc
ggaacaagttcaaacccccttcctccacctgcagctgcacctattggaggactttcagct
gctgaccttttggcctacgagcggcaactggcaatgagtaaaatgggtggggtccatgcc
ttgatgcatccacaagggcagcaccaccctcttaagcaggcagccatgggattgggtgct
gccggagctagccaagctatttatgatggtggctttcagaatgttgctgctgcgcagcag
ctcatgtactatcagtga
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