KEGG   Rhododendron vialii: 131298026
Entry
131298026         CDS       T09330                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
rvl  Rhododendron vialii
Pathway
rvl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131298026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131298026
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131298026
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     131298026
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 131298026
NCBI-ProteinID: XP_058179273
LinkDB
Position
8a:35005789..35010539
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERVIVGDL
YSDIPLGLYIIRGENVVLIGELDLEKDELPPHMTRVTEEEIKSAQKVEREASDLKGSMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctggaccggaggatatctatctatctacttctcttgcaagctatcttgat
aagaagcttcttgttttgctgagagatggtagaaaactgttgggaatacttcgttcattt
gatcaatttgctaatgccgttctcgaaagtgcgtgtgagcgagttattgttggtgatcta
tattctgacattccgttgggtttgtacataatccgtggggagaacgtcgttttaatcggc
gagctggatttggagaaggatgaacttccccctcatatgactcgtgttacagaagaagag
ataaaaagcgcacaaaaggtagaaagggaggcctcagatctgaaaggttccatgagaaag
aggatggagttccttgatatggactag

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