Rhododendron vialii: 131298026
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Entry
131298026 CDS
T09330
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rvl
Rhododendron vialii
Pathway
rvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131298026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131298026
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131298026
mRNA degradation factors
5'-3' decay
Lsm complex
131298026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
131298026
NCBI-ProteinID:
XP_058179273
LinkDB
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Position
8a:35005789..35010539
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERVIVGDL
YSDIPLGLYIIRGENVVLIGELDLEKDELPPHMTRVTEEEIKSAQKVEREASDLKGSMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctggaccggaggatatctatctatctacttctcttgcaagctatcttgat
aagaagcttcttgttttgctgagagatggtagaaaactgttgggaatacttcgttcattt
gatcaatttgctaatgccgttctcgaaagtgcgtgtgagcgagttattgttggtgatcta
tattctgacattccgttgggtttgtacataatccgtggggagaacgtcgttttaatcggc
gagctggatttggagaaggatgaacttccccctcatatgactcgtgttacagaagaagag
ataaaaagcgcacaaaaggtagaaagggaggcctcagatctgaaaggttccatgagaaag
aggatggagttccttgatatggactag
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